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Genome Information for Callipepla squamata
This project seeks to assemble and annotate the scaled quail (Callipepla squamata) genome, with subsequent comparative analyses involving established avian genome assemblies.
| Accession | PRJNA301734 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Callipepla squamata[Taxonomy ID: 9009] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Odontophoridae; Callipepla; Callipepla squamata |
| Publications | Oldeschulte DL et al., "Annotated Draft Genome Assemblies for the Northern Bobwhite (Colinus virginianus) and the Scaled Quail (Callipepla squamata) Reveal Disparate Estimates of Modern Genome Diversity and Historic Effective Population Size.", G3 (Bethesda), 2017 Sep 7;7(9):3047-3058 |
| Submission | Registration date: 13-Jul-2017
Texas A&M University |
| Relevance | Declining Wildlife Species and Experimental Wildlife Model |
| Locus Tag Prefix | ASZ78 |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 2642 |
| WGS master | 1 |
| SRA Experiments | 7 |
| Protein Sequences | 17131 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 1 |