Caenorhabditis nigoni strain:JU1422 (ID 384657) - BioProject

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Accession: PRJNA384657 ID: 384657

See Genome Information for Caenorhabditis nigoni

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2 additional projects are related by organism.

PacBio and Illumina sequencing was used to produce a Caenorhabditis nigoni genome assembly of near-chromosomal contiguity.

Accession	PRJNA384657
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Caenorhabditis nigoni[Taxonomy ID: 1611254] Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis nigoni
Publications	Yin D et al., "Rapid genome shrinkage in a self-fertile nematode reveals sperm competition proteins.", Science, 2018 Jan 5;359(6371):55-61
Grants	"Harnessing Transcriptomics to Identify and Test Novel Hookworm Vaccine Targets" (Grant ID R21 AI111173, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 3-Nov-2017 Cornell University
Relevance	Model Organism
Locus Tag Prefix	B9Z55

Project Data:

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_002742825.1	Chromosome	PDUG00000000	6	SAMN07759110	Caenorhabditis nigoni

Parameter	Value
Data volume, Gbases	56
Data volume, Mbytes	38173

Supplemental Content

GOLD: Gp0308724 [Genomes On Line Database]
GOLD: Gp0308724
Genomes On Line Database
SILVA LSU Database [SILVA]
SILVA LSU Database
SILVA
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

Caenorhabditis nigoni strain:JU1422
Caenorhabditis nigoni strain:JU1422
Caenorhabditis nigoni PacBio-based genome sequencing and assembly

BioProject
BioProject Links for Protein (Select 1273537849) (1)
BioProject
uncharacterized protein C9orf50 isoform X1 [Homo sapiens]
uncharacterized protein C9orf50 isoform X1 [Homo sapiens]
gi|767957371|ref|XP_011516957.1|

Protein
recombination/repair protein, partial [Halorubrum sp. TP025]
recombination/repair protein, partial [Halorubrum sp. TP025]
gi|154758319|emb|CAO82564.1|

Protein
SALL2 spalt like transcription factor 2 [Homo sapiens]
SALL2 spalt like transcription factor 2 [Homo sapiens]
Gene ID:6297

Gene

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