aquatic metagenome (ID 356693) - BioProject

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Accession: PRJNA356693 ID: 356693

aquatic metagenome

Uncultured Chloroflexi Genomic Bins Metagenomic assembly

This bioproject contains reconstructed genomic bins belonging to the uncultured representatives of the phylum Chloroflexi. More...

Accession	PRJNA356693
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	aquatic metagenome[Taxonomy ID: 1169740] unclassified sequences; metagenomes; ecological metagenomes; aquatic metagenome
Publications	Mehrshad M et al., "The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling.", ISME J, 2018 Mar;12(3):655-668
Submission	Registration date: 8-Dec-2017 Institute of Hydrobiology, Department of Aquatic Microbial Ecology, Biology Centre, CAS
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	1330
WGS master	31
Protein Sequences	29491
Publications
PubMed	1
PMC	1
Other datasets
BioSample	31
Assembly	31

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

31
31

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_009391875.1	QWJH00000000	SAMN09724371	Casp150-chloro-G12	Chloroflexota bacterium
GCA_009391845.1	QWJG00000000	SAMN09724372	Casp150-chloro-G14	Chloroflexota bacterium
GCA_009391835.1	QWJF00000000	SAMN09724373	Casp150-chloro-G5	Chloroflexota bacterium
GCA_009391795.1	QWJE00000000	SAMN09724374	Casp150-chloro-G9	Chloroflexota bacterium
GCA_009391785.1	QWJD00000000	SAMN09724375	Casp40-chloro-G10	Chloroflexota bacterium
GCA_009391775.1	QWJC00000000	SAMN09724376	Casp40-chloro-G14	Chloroflexota bacterium
GCA_009391735.1	QWJA00000000	SAMN09724378	Casp40-chloro-G4	Chloroflexota bacterium
GCA_009391745.1	QWJB00000000	SAMN09724377	Casp40-chloro-G2	Chloroflexota bacterium
GCA_009391695.1	QWIY00000000	SAMN09724380	Casp40-chloro-G9	Chloroflexota bacterium
GCA_009391705.1	QWIZ00000000	SAMN09724379	Casp40-chloro-G5	Chloroflexota bacterium
GCA_002816395.1	MUCL00000000	SAMN06121234	Ae2-Chloro-G1	SAR202 cluster bacterium Ae2-Chloro-G1
GCA_002816925.1	MUCM00000000	SAMN06121235	Ae2-Chloro-G2	SAR202 cluster bacterium Ae2-Chloro-G2
GCA_002816945.1	MUCN00000000	SAMN06121236	Ae2-Chloro-G3	SAR202 cluster bacterium Ae2-Chloro-G3
GCA_002816325.1	MUCH00000000	SAMN06121169	Casp-Chloro-G1	SAR202 cluster bacterium Casp-Chloro-G1
GCA_002816575.1	MUCI00000000	SAMN06121170	Casp-Chloro-G2	SAR202 cluster bacterium Casp-Chloro-G2
GCA_002816715.1	MUCJ00000000	SAMN06121171	Casp-Chloro-G3	SAR202 cluster bacterium Casp-Chloro-G3
GCA_002816705.1	MUCK00000000	SAMN06121187	Casp-Chloro-G4	SAR202 cluster bacterium Casp-Chloro-G4
GCA_002816375.1	MUCO00000000	SAMN06121237	Io17-Chloro-G1	SAR202 cluster bacterium Io17-Chloro-G1
GCA_002816875.1	MUCP00000000	SAMN06121238	Io17-Chloro-G2	SAR202 cluster bacterium Io17-Chloro-G2
GCA_002816985.1	MUCQ00000000	SAMN06121239	Io17-Chloro-G3	SAR202 cluster bacterium Io17-Chloro-G3
GCA_002816455.1	MUCR00000000	SAMN06121240	Io17-Chloro-G4	SAR202 cluster bacterium Io17-Chloro-G4
GCA_002816355.1	MUCS00000000	SAMN06121264	Io17-Chloro-G5	SAR202 cluster bacterium Io17-Chloro-G5
GCA_002816585.1	MUCT00000000	SAMN06121288	Io17-Chloro-G6	SAR202 cluster bacterium Io17-Chloro-G6
GCA_002817055.1	MUCU00000000	SAMN06121290	Io17-Chloro-G7	SAR202 cluster bacterium Io17-Chloro-G7
GCA_002817135.1	MUCV00000000	SAMN06121291	Io17-Chloro-G8	SAR202 cluster bacterium Io17-Chloro-G8
GCA_002816675.1	MUCW00000000	SAMN06121322	Io17-Chloro-G9	SAR202 cluster bacterium Io17-Chloro-G9
GCA_002817285.1	MUDB00000000	SAMN06121367	MP-NPac-SRR3961935-G1	SAR202 cluster bacterium MP-NPac-SRR3961935-G1
GCA_002817125.1	MUCX00000000	SAMN06121323	MP-SAtl-SRR3965592-G1	SAR202 cluster bacterium MP-SAtl-SRR3965592-G1
GCA_002817175.1	MUCY00000000	SAMN06121325	MP-SAtl-SRR3965592-G2	SAR202 cluster bacterium MP-SAtl-SRR3965592-G2
GCA_002817235.1	MUCZ00000000	SAMN06121365	MP-SInd-SRR3963457-G1	SAR202 cluster bacterium MP-SInd-SRR3963457-G1
GCA_002816735.1	MUDA00000000	SAMN06121366	MP-SInd-SRR3963457-G2	SAR202 cluster bacterium MP-SInd-SRR3963457-G2

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aquatic metagenome

Uncultured Chloroflexi Genomic Bins Metagenomic assembly

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