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Links from Protein

Accession: PRJNA351262 ID: 351262

halite metagenome

Halite metagenome Metagenomic assembly

Metagenomes from 26 salt crust samples taken along a fog gradient from the Salar Llamara in the hyperarid region of the Atacama Desert, Chile
AccessionPRJNA351262
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismhalite metagenome[Taxonomy ID: 1319833]
unclassified sequences; metagenomes; ecological metagenomes; halite metagenome
PublicationsFinstad KM et al., "Microbial Community Structure and the Persistence of Cyanobacterial Populations in Salt Crusts of the Hyperarid Atacama Desert from Genome-Resolved Metagenomics.", Front Microbiol, 2017;8:1435
Grants
  • "DISSERTATION RESEARCH: Living on the Edge: Biodiversity and Metabolic Potential of Microbial Communities in Salt Crusts of the Hyperarid Atacama Desert" (Grant ID 1406956, National Science Foundation)
SubmissionRegistration date: 19-Mar-2018
None
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)23981
WGS master139
SRA Experiments27
Protein Sequences270349
Publications
PubMed1
PMC1
Other datasets
BioSample166
Assembly139
Genome assemblies, organelles and plasmids:
Assembly GCA_003009755.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXUB00000000
Assembly GCA_003009775.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPF00000000
Assembly GCA_003009795.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPE00000000
Assembly GCA_003009815.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPD00000000
Assembly GCA_003009825.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPC00000000
Assembly GCA_003009845.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPB00000000
Assembly GCA_003020925.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRT00000000
Assembly GCA_003020945.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRU00000000
Assembly GCA_003020965.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRL00000000
Assembly GCA_003020985.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRM00000000
Assembly GCA_003021005.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRI00000000
Assembly GCA_003021015.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRK00000000
Assembly GCA_003021045.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRN00000000
Assembly GCA_003021055.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRH00000000
Assembly GCA_003021085.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRE00000000
Assembly GCA_003021105.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRG00000000
Assembly GCA_003021115.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQX00000000
Assembly GCA_003021145.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRD00000000
Assembly GCA_003021165.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQW00000000
Assembly GCA_003021175.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQV00000000
Assembly GCA_003021205.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQS00000000
Assembly GCA_003021225.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQQ00000000
Assembly GCA_003021235.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQR00000000
Assembly GCA_003021245.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQP00000000
Assembly GCA_003021285.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQO00000000
Assembly GCA_003021305.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQN00000000
Assembly GCA_003021325.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQM00000000
Assembly GCA_003021335.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQL00000000
Assembly GCA_003021365.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQJ00000000
Assembly GCA_003021375.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQF00000000
Assembly GCA_003021405.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQB00000000
Assembly GCA_003021425.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQA00000000
Assembly GCA_003021435.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPZ00000000
Assembly GCA_003021465.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPX00000000
Assembly GCA_003021485.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPV00000000
Assembly GCA_003021505.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPT00000000
Assembly GCA_003021525.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPP00000000
Assembly GCA_003021535.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPM00000000
Assembly GCA_003021545.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPL00000000
Assembly GCA_003021585.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPK00000000
Assembly GCA_003021605.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPJ00000000
Assembly GCA_003021615.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPH00000000
Assembly GCA_003021645.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPG00000000
Assembly GCA_003021655.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRP00000000
Assembly GCA_003021685.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRO00000000
Assembly GCA_003021705.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRJ00000000
Assembly GCA_003021725.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRA00000000
Assembly GCA_003021745.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQY00000000
Assembly GCA_003021755.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQZ00000000
Assembly GCA_003021785.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQU00000000
Assembly GCA_003021795.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQT00000000
Assembly GCA_003021825.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQE00000000
Assembly GCA_003021845.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQC00000000
Assembly GCA_003021855.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPW00000000
Assembly GCA_003021885.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPS00000000
Assembly GCA_003021905.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPI00000000
Assembly GCA_003021915.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOY00000000
Assembly GCA_003021925.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPQ00000000
Assembly GCA_003021965.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOV00000000
Assembly GCA_003021975.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRR00000000
Assembly GCA_003022005.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRQ00000000
Assembly GCA_003022025.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRF00000000
Assembly GCA_003022045.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRC00000000
Assembly GCA_003022055.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRB00000000
Assembly GCA_003022085.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQK00000000
Assembly GCA_003022095.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQI00000000
Assembly GCA_003022125.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQH00000000
Assembly GCA_003022145.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQG00000000
Assembly GCA_003022165.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXQD00000000
Assembly GCA_003022175.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPY00000000
Assembly GCA_003022205.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPU00000000
Assembly GCA_003022225.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPR00000000
Assembly GCA_003022245.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPO00000000
Assembly GCA_003022255.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPA00000000
Assembly GCA_003022265.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXPN00000000
Assembly GCA_003022305.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOZ00000000
Assembly GCA_003022325.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOW00000000
Assembly GCA_003022345.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOX00000000
Assembly GCA_003022365.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXOU00000000
Assembly GCA_003022425.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXUC00000000
Assembly GCA_003022435.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXUA00000000
Assembly GCA_003022465.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTZ00000000
Assembly GCA_003022485.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTS00000000
Assembly GCA_003022505.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTQ00000000
Assembly GCA_003022515.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTU00000000
Assembly GCA_003022535.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTT00000000
Assembly GCA_003022565.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTN00000000
Assembly GCA_003022585.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTP00000000
Assembly GCA_003022605.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTJ00000000
Assembly GCA_003022615.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTE00000000
Assembly GCA_003022645.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTB00000000
Assembly GCA_003022655.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSX00000000
Assembly GCA_003022685.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSV00000000
Assembly GCA_003022705.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSW00000000
Assembly GCA_003022725.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSQ00000000
Assembly GCA_003022745.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSU00000000
Assembly GCA_003022765.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSR00000000
Assembly GCA_003022785.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSO00000000
Assembly GCA_003022805.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSP00000000
Assembly GCA_003022815.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSL00000000
Assembly GCA_003022845.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSF00000000
Assembly GCA_003022865.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSK00000000
Assembly GCA_003022885.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSH00000000
Assembly GCA_003022905.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSE00000000
Assembly GCA_003022925.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRY00000000
Assembly GCA_003022945.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRZ00000000
Assembly GCA_003022965.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTY00000000
Assembly GCA_003022975.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTI00000000
Assembly GCA_003022985.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTV00000000
Assembly GCA_003023025.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTM00000000
Assembly GCA_003023045.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTH00000000
Assembly GCA_003023065.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTF00000000
Assembly GCA_003023085.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTD00000000
Assembly GCA_003023105.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSZ00000000
Assembly GCA_003023125.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSY00000000
Assembly GCA_003023145.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTC00000000
Assembly GCA_003023165.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSD00000000
Assembly GCA_003023185.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSB00000000
Assembly GCA_003023195.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRX00000000
Assembly GCA_003023215.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSN00000000
Assembly GCA_003023245.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTR00000000
Assembly GCA_003023265.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTO00000000
Assembly GCA_003023275.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTX00000000
Assembly GCA_003023295.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTW00000000
Assembly GCA_003023315.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTL00000000
Assembly GCA_003023345.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTK00000000
Assembly GCA_003023365.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTG00000000
Assembly GCA_003023385.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXTA00000000
Assembly GCA_003023405.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXST00000000
Assembly GCA_003023415.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSS00000000
Assembly GCA_003023445.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSJ00000000
Assembly GCA_003023455.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSI00000000
Assembly GCA_003023465.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSM00000000
Assembly GCA_003023485.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSG00000000
Assembly GCA_003023525.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRV00000000
Assembly GCA_003023535.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSC00000000
Assembly GCA_003023565.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXSA00000000
Assembly GCA_003023575.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRW00000000
Assembly GCA_003023785.1 :
NameGenBank
Whole Genome Shotgun AssemblyPXRS00000000
SRA Data Details
ParameterValue
Data volume, Gbases86
Data volume, Mbytes68962

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