microbial mat metagenome (ID 436342) - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from Protein

Accession: PRJNA436342 ID: 436342

microbial mat metagenome

Metagenomic assembly of new (sub)arctic Cyanobacteria and their associated microbiome from non-axenic cultures

Metagenomic assembly of Cyanobacteria

Accession	PRJNA436342
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	microbial mat metagenome[Taxonomy ID: 527640] unclassified sequences; metagenomes; ecological metagenomes; microbial mat metagenome
Submission	Registration date: 18-Jun-2018 ULg
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5363
WGS master	27
SRA Experiments	17
Protein Sequences	100135
Other datasets
BioSample	44
Assembly	27

Assembly details:

Download

Assembly level

Number of Assemblies

Scaffold

Total

27
27

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_003241875.1	QBLU00000000	SAMN08896000	ULC179bin3	Alphaproteobacteria bacterium
GCA_003241825.1	QBLX00000000	SAMN08895997	ULC165bin2	Alphaproteobacteria bacterium
GCA_003242075.1	QBMO00000000	SAMN08895980	ULC027bin2	Alphaproteobacteria bacterium
GCA_003241995.1	QBME00000000	SAMN08895990	ULC084bin2	Alphaproteobacteria bacterium
GCA_003241905.1	QBLW00000000	SAMN08895998	ULC179bin1	Alphaproteobacteria bacterium
GCA_003241935.1	QBLZ00000000	SAMN08895995	ULC146bin4	Betaproteobacteria bacterium
GCA_003242045.1	QBMI00000000	SAMN08895986	ULC073bin2	Betaproteobacteria bacterium
GCA_003242005.1	QBMF00000000	SAMN08895989	ULC084bin1	Betaproteobacteria bacterium
GCA_003241965.1	QBMB00000000	SAMN08895993	ULC146bin1	Burkholderiales bacterium
GCA_003249115.1	QBMD00000000	SAMN08895991	ULC084bin3	Cyanobium sp.
GCA_003249045.1	QBMM00000000	SAMN08895982	ULC065bin1	Cyanobium sp.
GCA_003248995.1	QBMG00000000	SAMN08895988	ULC082bin1	Cyanobium sp.
GCA_003241955.1	QBMA00000000	SAMN08895994	ULC146bin2	Flavobacteriaceae bacterium
GCA_003242135.1	QBMR00000000	SAMN08895977	ULC335bin2	Flavobacteriaceae bacterium
GCA_003241815.1	QBLV00000000	SAMN08895999	ULC179bin2	Hyphomicrobiales bacterium
GCA_003242035.1	QBMC00000000	SAMN08895992	ULC129bin1	Leptolyngbya foveolarum
GCA_003249105.1	QBLT00000000	SAMN08896001	ULC186bin1	Leptolyngbya sp.
GCA_003249025.1	QBMH00000000	SAMN08895987	ULC077bin1	Leptolyngbya sp.
GCA_003249155.1	QBMJ00000000	SAMN08895985	ULC073bin1	Leptolyngbya sp.
GCA_003241895.1	QBLY00000000	SAMN08895996	ULC165bin1	Lysobacteraceae bacterium
GCA_003242125.1	QBMQ00000000	SAMN08895978	ULC007bin1	Phormidesmis priestleyi
GCA_003242115.1	QBMP00000000	SAMN08895979	ULC027bin1	Phormidesmis priestleyi
GCA_003242085.1	QBML00000000	SAMN08895983	ULC066bin1	Pseudanabaena frigida
GCA_003249015.1	QBLS00000000	SAMN08896002	ULC187bin1	Pseudanabaena sp.
GCA_003249035.1	QBMK00000000	SAMN08895984	ULC068bin1	Pseudanabaena sp.
GCA_003241845.1	QBMN00000000	SAMN08895981	ULC041bin1	Shackletoniella antarctica
GCA_003249095.1	QBMS00000000	SAMN08895976	ULC335bin1	Snowella sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	5
Data volume, Mbytes	3474

BioProject

Result Filters

Display Settings:

Send to:

Links from Protein

microbial mat metagenome

Metagenomic assembly of new (sub)arctic Cyanobacteria and their associated microbiome from non-axenic cultures

Supplemental Content

Related information

LinkOut to external resources

Recent activity