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Links from Protein

Accession: PRJNA355136 ID: 355136

subsurface metagenome

subsurface metagenome Metagenomic assembly

Metagenome assembled genomes (MAGs) reconstructed from subsurface fluids gathered 1.5 km underground to investigate microbial ecology and metabolic capability in the deep terrestrial subsurface
AccessionPRJNA355136
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismsubsurface metagenome[Taxonomy ID: 1564682]
unclassified sequences; metagenomes; ecological metagenomes; subsurface metagenome
PublicationsMomper L et al., "Energy and carbon metabolisms in a deep terrestrial subsurface fluid microbial community.", ISME J, 2017 Oct;11(10):2319-2333
SubmissionRegistration date: 26-Sep-2018
University of Southern California
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)6553
WGS master74
Protein Sequences174628
Publications
PubMed1
PMC1
Other datasets
BioSample77
Assembly74
Assembly details:
Assembly levelNumber of Assemblies
74
74
AssemblyLevelWGSBioSampleTaxonomy
GCA_003605085.1ContigQZKD00000000SAMN08499016
GCA_003598015.1ContigQZKE00000000SAMN08499015
GCA_003599545.1ContigQZKT00000000SAMN08499000
GCA_003599235.1ContigQZJE00000000SAMN08499041
GCA_003604985.1ContigQZIW00000000SAMN08499049
GCA_003599805.1ContigQZJV00000000SAMN08499024
GCA_003599285.1ContigQZJJ00000000SAMN08499036
GCA_003598975.1ContigQZIJ00000000SAMN08499062
GCA_003598935.1ContigQZIG00000000SAMN08499065
GCA_003604935.1ContigQZII00000000SAMN08499063
GCA_003599345.1ContigQZJP00000000SAMN08499030
GCA_003598055.1ContigQZKI00000000SAMN08499011
GCA_003598085.1ContigQZKU00000000SAMN08498999
GCA_003599815.1ContigQZJZ00000000SAMN08499020
GCA_003599105.1ContigQZIS00000000SAMN08499053
GCA_003599085.1ContigQZIN00000000SAMN08499058
GCA_003599075.1ContigQZIO00000000SAMN08499057
GCA_003599685.1ContigQZJC00000000SAMN08499043
GCA_003599715.1ContigQZJH00000000SAMN08499038
GCA_003598175.1ContigQZKN00000000SAMN08499006
GCA_003598135.1ContigQZKA00000000SAMN08499019
GCA_003598025.1ContigQZKH00000000SAMN08499012
GCA_003597955.1ContigQZJU00000000SAMN08499025
GCA_003599755.1ContigQZJO00000000SAMN08499031
GCA_003599675.1ContigQZJB00000000SAMN08499044
GCA_003599635.1ContigQZIX00000000SAMN08499048
GCA_003599625.1ContigQZIU00000000SAMN08499051
GCA_003599595.1ContigQZIP00000000SAMN08499056
GCA_003599205.1ContigQZJA00000000SAMN08499045
GCA_003599175.1ContigQZIY00000000SAMN08499047
GCA_003599135.1ContigQZIV00000000SAMN08499050
GCA_003599335.1ContigQZJN00000000SAMN08499032
GCA_003599295.1ContigQZJK00000000SAMN08499035
GCA_003598945.1ContigQZIH00000000SAMN08499064
GCA_003598915.1ContigQZIF00000000SAMN08499066
GCA_003598995.1ContigQZIE00000000SAMN08499067
GCA_003599055.1ContigQZIM00000000SAMN08499059
GCA_003599145.1ContigQZIT00000000SAMN08499052
GCA_003599535.1ContigQZKQ00000000SAMN08499003
GCA_003599455.1ContigQZKF00000000SAMN08499014
GCA_003597995.1ContigQZJY00000000SAMN08499021
GCA_003599745.1ContigQZJL00000000SAMN08499034
GCA_003599735.1ContigQZJI00000000SAMN08499037
GCA_003598145.1ContigQZKL00000000SAMN08499008
GCA_003599365.1ContigQZJR00000000SAMN08499028
GCA_003599195.1ContigQZIZ00000000SAMN08499046
GCA_003605055.1ContigQZKP00000000SAMN08499004
GCA_003599015.1ContigQZIK00000000SAMN08499061
GCA_003599615.1ContigQZIQ00000000SAMN08499055
GCA_003599475.1ContigQZKK00000000SAMN08499009
GCA_003599575.1ContigQZKV00000000SAMN08498998
GCA_003599865.1ContigQZKS00000000SAMN08499001
GCA_003599885.1ContigQZKW00000000SAMN08498997
GCA_003597945.1ContigQZJS00000000SAMN08499027
GCA_003604995.1ContigQZJD00000000SAMN08499042
GCA_003604975.1ContigQZIR00000000SAMN08499054
GCA_003605035.1ContigQZKJ00000000SAMN08499010
GCA_003605065.1ContigQZJM00000000SAMN08499033
GCA_003599855.1ContigQZKG00000000SAMN08499013
GCA_003599485.1ContigQZKM00000000SAMN08499007
GCA_003599395.1ContigQZJX00000000SAMN08499022
GCA_003599415.1ContigQZKB00000000SAMN08499018
GCA_003598065.1ContigQZKR00000000SAMN08499002
GCA_003599505.1ContigQZKO00000000SAMN08499005
GCA_003599795.1ContigQZJQ00000000SAMN08499029
GCA_003599425.1ContigQZKC00000000SAMN08499017
GCA_003599275.1ContigQZJG00000000SAMN08499039
GCA_003599025.1ContigQZIL00000000SAMN08499060
GCA_003605115.1ContigQZKY00000000SAMN08498995
GCA_003598855.1ContigQZID00000000SAMN08499068
GCA_003597935.1ContigQZJT00000000SAMN08499026
GCA_003599915.1ContigQZKX00000000SAMN08498996
GCA_003598115.1ContigQZJW00000000SAMN08499023
GCA_003599255.1ContigQZJF00000000SAMN08499040

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