subsurface metagenome (ID 355136) - BioProject

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Accession: PRJNA355136 ID: 355136

subsurface metagenome

subsurface metagenome Metagenomic assembly

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This project is a component of the Subsurface Metagenome Umbrella BioProject

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1 additional project is a component of the Subsurface Metagenome Umbrella BioProject.

Metagenome assembled genomes (MAGs) reconstructed from subsurface fluids gathered 1.5 km underground to investigate microbial ecology and metabolic capability in the deep terrestrial subsurface

Accession	PRJNA355136
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	subsurface metagenome[Taxonomy ID: 1564682] unclassified sequences; metagenomes; ecological metagenomes; subsurface metagenome
Publications	Momper L et al., "Energy and carbon metabolisms in a deep terrestrial subsurface fluid microbial community.", ISME J, 2017 Oct;11(10):2319-2333
Submission	Registration date: 26-Sep-2018 University of Southern California
Related Resources	NASA Astrobiology Institute- Life Underground
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6553
WGS master	74
Protein Sequences	174628
Publications
PubMed	1
PMC	1
Other datasets
BioSample	77
Assembly	74

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

74
74

Assembly	WGS	BioSample	Taxonomy
GCA_003605085.1	QZKD00000000	SAMN08499016	Acholeplasma sp.
GCA_003599545.1	QZKT00000000	SAMN08499000	Actinomycetota bacterium
GCA_003599235.1	QZJE00000000	SAMN08499041	Actinomycetota bacterium
GCA_003598015.1	QZKE00000000	SAMN08499015	Actinomycetota bacterium
GCA_003604985.1	QZIW00000000	SAMN08499049	Ammonifex sp.
GCA_003599805.1	QZJV00000000	SAMN08499024	Anaerolineaceae bacterium
GCA_003599285.1	QZJJ00000000	SAMN08499036	Anaerolineaceae bacterium
GCA_003598975.1	QZIJ00000000	SAMN08499062	Anaerolineaceae bacterium
GCA_003598935.1	QZIG00000000	SAMN08499065	Anaerolineaceae bacterium
GCA_003604935.1	QZII00000000	SAMN08499063	Armatimonadota bacterium
GCA_003599345.1	QZJP00000000	SAMN08499030	Bacillota bacterium
GCA_003598055.1	QZKI00000000	SAMN08499011	Candidatus Abyssobacteria bacterium SURF_17
GCA_003598085.1	QZKU00000000	SAMN08498999	Candidatus Abyssobacteria bacterium SURF_5
GCA_003599815.1	QZJZ00000000	SAMN08499020	Candidatus Auribacter fodinae
GCA_003599105.1	QZIS00000000	SAMN08499053	Candidatus Latescibacterota bacterium
GCA_003599085.1	QZIN00000000	SAMN08499058	Candidatus Microgenomates bacterium
GCA_003599075.1	QZIO00000000	SAMN08499057	Candidatus Microgenomates bacterium
GCA_003599715.1	QZJH00000000	SAMN08499038	Candidatus Microgenomates bacterium
GCA_003599685.1	QZJC00000000	SAMN08499043	Candidatus Microgenomates bacterium
GCA_003598025.1	QZKH00000000	SAMN08499012	Candidatus Omnitrophota bacterium
GCA_003598175.1	QZKN00000000	SAMN08499006	Candidatus Omnitrophota bacterium
GCA_003598135.1	QZKA00000000	SAMN08499019	Candidatus Omnitrophota bacterium
GCA_003598995.1	QZIE00000000	SAMN08499067	Candidatus Parcubacteria bacterium
GCA_003597955.1	QZJU00000000	SAMN08499025	Candidatus Parcubacteria bacterium
GCA_003599635.1	QZIX00000000	SAMN08499048	Candidatus Parcubacteria bacterium
GCA_003599625.1	QZIU00000000	SAMN08499051	Candidatus Parcubacteria bacterium
GCA_003599595.1	QZIP00000000	SAMN08499056	Candidatus Parcubacteria bacterium
GCA_003599755.1	QZJO00000000	SAMN08499031	Candidatus Parcubacteria bacterium
GCA_003599675.1	QZJB00000000	SAMN08499044	Candidatus Parcubacteria bacterium
GCA_003599205.1	QZJA00000000	SAMN08499045	Candidatus Parcubacteria bacterium
GCA_003599175.1	QZIY00000000	SAMN08499047	Candidatus Parcubacteria bacterium
GCA_003599135.1	QZIV00000000	SAMN08499050	Candidatus Parcubacteria bacterium
GCA_003599335.1	QZJN00000000	SAMN08499032	Candidatus Parcubacteria bacterium
GCA_003599295.1	QZJK00000000	SAMN08499035	Candidatus Parcubacteria bacterium
GCA_003598945.1	QZIH00000000	SAMN08499064	Candidatus Parcubacteria bacterium
GCA_003598915.1	QZIF00000000	SAMN08499066	Candidatus Parcubacteria bacterium
GCA_003599145.1	QZIT00000000	SAMN08499052	Candidatus Woesearchaeota archaeon
GCA_003599055.1	QZIM00000000	SAMN08499059	Candidatus Woesearchaeota archaeon
GCA_003599535.1	QZKQ00000000	SAMN08499003	Candidatus Zixiibacteriota bacterium
GCA_003599455.1	QZKF00000000	SAMN08499014	Comamonadaceae bacterium
GCA_003599745.1	QZJL00000000	SAMN08499034	Dehalococcoidia bacterium
GCA_003599735.1	QZJI00000000	SAMN08499037	Dehalococcoidia bacterium
GCA_003597995.1	QZJY00000000	SAMN08499021	Dehalococcoidia bacterium
GCA_003598145.1	QZKL00000000	SAMN08499008	Deltaproteobacteria bacterium
GCA_003599195.1	QZIZ00000000	SAMN08499046	Deltaproteobacteria bacterium
GCA_003599365.1	QZJR00000000	SAMN08499028	Deltaproteobacteria bacterium
GCA_003605055.1	QZKP00000000	SAMN08499004	Desulfarculus sp.
GCA_003599575.1	QZKV00000000	SAMN08498998	Desulfobacteraceae bacterium
GCA_003599615.1	QZIQ00000000	SAMN08499055	Desulfobacteraceae bacterium
GCA_003599475.1	QZKK00000000	SAMN08499009	Desulfobacteraceae bacterium
GCA_003599865.1	QZKS00000000	SAMN08499001	Desulfobacteraceae bacterium
GCA_003599885.1	QZKW00000000	SAMN08498997	Desulfobacteraceae bacterium
GCA_003599015.1	QZIK00000000	SAMN08499061	Desulfobacteraceae bacterium
GCA_003597945.1	QZJS00000000	SAMN08499027	Desulfobacteraceae bacterium
GCA_003604995.1	QZJD00000000	SAMN08499042	Desulfobulbus sp.
GCA_003604975.1	QZIR00000000	SAMN08499054	Desulforudis sp.
GCA_003605035.1	QZKJ00000000	SAMN08499010	Desulfurivibrio sp.
GCA_003605065.1	QZJM00000000	SAMN08499033	Dethiobacter sp.
GCA_003599855.1	QZKG00000000	SAMN08499013	Gaiellales bacterium
GCA_003599485.1	QZKM00000000	SAMN08499007	Gammaproteobacteria bacterium
GCA_003599415.1	QZKB00000000	SAMN08499018	Ignavibacteriales bacterium
GCA_003599395.1	QZJX00000000	SAMN08499022	Ignavibacteriales bacterium
GCA_003598065.1	QZKR00000000	SAMN08499002	Myxococcales bacterium
GCA_003599425.1	QZKC00000000	SAMN08499017	Nitrospiraceae bacterium
GCA_003599505.1	QZKO00000000	SAMN08499005	Nitrospiraceae bacterium
GCA_003599795.1	QZJQ00000000	SAMN08499029	Nitrospiraceae bacterium
GCA_003599275.1	QZJG00000000	SAMN08499039	Nitrospiraceae bacterium
GCA_003599025.1	QZIL00000000	SAMN08499060	Nitrospiraceae bacterium
GCA_003605115.1	QZKY00000000	SAMN08498995	Oxalobacter sp.
GCA_003598855.1	QZID00000000	SAMN08499068	Peptococcaceae bacterium
GCA_003597935.1	QZJT00000000	SAMN08499026	Phycisphaerales bacterium
GCA_003599915.1	QZKX00000000	SAMN08498996	Stygiobacter sp.
GCA_003598115.1	QZJW00000000	SAMN08499023	candidate division WS5 bacterium
GCA_003599255.1	QZJF00000000	SAMN08499040	candidate division WWE3 bacterium

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subsurface metagenome

subsurface metagenome Metagenomic assembly

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