marine sediment metagenome (ID 526329) - BioProject

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Accession: PRJNA526329 ID: 526329

marine sediment metagenome

Mariana and Kermadec trench Metagenomes

Assembled metagenomes from the Mariana and Kermadec trenches

Accession	PRJNA526329
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Submission	Registration date: 19-Mar-2019 Scripps Institution of Oceanography
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	14538
WGS master	80
SRA Experiments	1
Protein Sequences	147415
Other datasets
BioSample	80
Assembly	80

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

80
80

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_004357035.1	SMXY00000000	SAMN11097091	CR04bin22	Acidobacteriota bacterium
GCA_004356905.1	SMYH00000000	SAMN11097100	CR05bin28	Acidobacteriota bacterium
GCA_004356925.1	SMXX00000000	SAMN11097090	N074bin49	Acidobacteriota bacterium
GCA_004356915.1	SMXZ00000000	SAMN11097092	CR02bin11	Acidobacteriota bacterium
GCA_004356805.1	SMXW00000000	SAMN11097089	N075bin71	Acidobacteriota bacterium
GCA_004356235.1	SMYE00000000	SAMN11097097	N074bin36	Acidobacteriota bacterium
GCA_004356095.1	SMYF00000000	SAMN11097098	N074bin35	Acidobacteriota bacterium
GCA_004356175.1	SMXV00000000	SAMN11097088	N075bin75	Acidobacteriota bacterium
GCA_004356055.1	SMYI00000000	SAMN11097101	CR04bin20	Acidobacteriota bacterium
GCA_004356045.1	SMYG00000000	SAMN11097099	CR05bin31	Acidobacteriota bacterium
GCA_004356115.1	SMYB00000000	SAMN11097094	N075bin66	Acidobacteriota bacterium
GCA_004356015.1	SMYD00000000	SAMN11097096	N074bin37	Acidobacteriota bacterium
GCA_004356005.1	SMYA00000000	SAMN11097093	N075bin69	Acidobacteriota bacterium
GCA_004356105.1	SMYC00000000	SAMN11097095	N075bin57	Acidobacteriota bacterium
GCA_004356955.1	SMXS00000000	SAMN11097085	N074bin47	Alphaproteobacteria bacterium
GCA_004356335.1	SMXP00000000	SAMN11097082	N075bin68	Alphaproteobacteria bacterium
GCA_004356855.1	SMXT00000000	SAMN11097086	N074bin41	Alphaproteobacteria bacterium
GCA_004356025.1	SMXU00000000	SAMN11097087	CR02bin4	Alphaproteobacteria bacterium
GCA_004356985.1	SMXQ00000000	SAMN11097083	N075bin64	Alphaproteobacteria bacterium
GCA_004356215.1	SMXR00000000	SAMN11097084	N074bin56	Alphaproteobacteria bacterium
GCA_004356255.1	SMXM00000000	SAMN11097079	N074bin44	Bacteroidota bacterium
GCA_004356265.1	SMXK00000000	SAMN11097077	N075bin62	Bacteroidota bacterium
GCA_004356275.1	SMXN00000000	SAMN11097080	CR04bin24	Bacteroidota bacterium
GCA_004356345.1	SMXO00000000	SAMN11097081	CR04bin13	Bacteroidota bacterium
GCA_004356305.1	SMXJ00000000	SAMN11097076	N075bin70	Bacteroidota bacterium
GCA_004356385.1	SMXL00000000	SAMN11097078	N074bin50	Bacteroidota bacterium
GCA_004356405.1	SMXI00000000	SAMN11097075	N074bin54	Betaproteobacteria bacterium
GCA_004356835.1	SMXH00000000	SAMN11097074	N074bin55	Betaproteobacteria bacterium
GCA_004356775.1	SMXG00000000	SAMN11097073	N075bin73	Betaproteobacteria bacterium
GCA_004356185.1	SMXF00000000	SAMN11097072	CR02bin12	Caldithrix sp.
GCA_004356825.1	SMXC00000000	SAMN11097069	N075bin58	Caldithrix sp.
GCA_004357015.1	SMXE00000000	SAMN11097071	CR04bin15	Caldithrix sp.
GCA_004356135.1	SMXD00000000	SAMN11097070	N074bin33	Caldithrix sp.
GCA_004356535.1	SMWW00000000	SAMN11097063	CR04bin25	Candidatus Dadabacteria bacterium
GCA_004356555.1	SMWY00000000	SAMN11097065	CR02bin9	Candidatus Dadabacteria bacterium
GCA_004356475.1	SMXA00000000	SAMN11097067	CR04bin19	Chloroflexota bacterium
GCA_004356815.1	SMXB00000000	SAMN11097068	CR04bin16	Chloroflexota bacterium
GCA_004356455.1	SMWZ00000000	SAMN11097066	CR02bin3	Deltaproteobacteria bacterium
GCA_004356505.1	SMWX00000000	SAMN11097064	CR04bin17	Deltaproteobacteria bacterium
GCA_004356595.1	SMWV00000000	SAMN11097062	CR04bin27	Deltaproteobacteria bacterium
GCA_004356615.1	SMWT00000000	SAMN11097060	N074bin46	Deltaproteobacteria bacterium
GCA_004356735.1	SMWR00000000	SAMN11097058	N075bin65	Deltaproteobacteria bacterium
GCA_004356685.1	SMWS00000000	SAMN11097059	N074bin48	Deltaproteobacteria bacterium
GCA_004356635.1	SMWU00000000	SAMN11097061	N074bin34	Deltaproteobacteria bacterium
GCA_004357595.1	SMWB00000000	SAMN11097042	N075bin74	Gammaproteobacteria bacterium
GCA_004357585.1	SMWA00000000	SAMN11097041	N075bin76	Gammaproteobacteria bacterium
GCA_004357505.1	SMWC00000000	SAMN11097043	N075bin72	Gammaproteobacteria bacterium
GCA_004356695.1	SMWQ00000000	SAMN11097057	CR02bin1	Gammaproteobacteria bacterium
GCA_004357005.1	SMWH00000000	SAMN11097048	N074bin51	Gammaproteobacteria bacterium
GCA_004356895.1	SMWK00000000	SAMN11097051	CR05bin32	Gammaproteobacteria bacterium
GCA_004357495.1	SMWD00000000	SAMN11097044	N075bin67	Gammaproteobacteria bacterium
GCA_004357475.1	SMWE00000000	SAMN11097045	N075bin63	Gammaproteobacteria bacterium
GCA_004357385.1	SMWF00000000	SAMN11097046	N075bin60	Gammaproteobacteria bacterium
GCA_004357305.1	SMWM00000000	SAMN11097053	CR04bin14	Gammaproteobacteria bacterium
GCA_004356745.1	SMWI00000000	SAMN11097049	N074bin43	Gammaproteobacteria bacterium
GCA_004356715.1	SMWG00000000	SAMN11097047	N074bin52	Gammaproteobacteria bacterium
GCA_004356365.1	SMWJ00000000	SAMN11097050	N074bin40	Gammaproteobacteria bacterium
GCA_004356585.1	SMWO00000000	SAMN11097055	CR02bin5	Gammaproteobacteria bacterium
GCA_004356525.1	SMWL00000000	SAMN11097052	CR05bin30	Gammaproteobacteria bacterium
GCA_004356645.1	SMWP00000000	SAMN11097056	CR02bin10	Gammaproteobacteria bacterium
GCA_004356415.1	SMWN00000000	SAMN11097054	CR02bin7	Gammaproteobacteria bacterium
GCA_004357415.1	SMVY00000000	SAMN11097039	N074bin45	Gemmatimonadota bacterium
GCA_004357565.1	SMVZ00000000	SAMN11097040	CR02bin6	Gemmatimonadota bacterium
GCA_004357425.1	SMVX00000000	SAMN11097038	CR04bin21	Ignavibacteria bacterium
GCA_004357485.1	SMVW00000000	SAMN11097037	CR02bin8	Nitrospina sp.
GCA_004357435.1	SMVS00000000	SAMN11097033	N074bin53	Nitrospina sp.
GCA_004357575.1	SMVV00000000	SAMN11097036	CR04bin23	Nitrospina sp.
GCA_004357365.1	SMVT00000000	SAMN11097034	CR05bin29	Nitrospina sp.
GCA_004357335.1	SMVU00000000	SAMN11097035	CR04bin26	Nitrospina sp.
GCA_004357655.1	SMVQ00000000	SAMN11097031	N075bin59	Planctomycetota bacterium
GCA_004357645.1	SMVR00000000	SAMN11097032	N074bin39	Planctomycetota bacterium
GCA_004357725.1	SMVP00000000	SAMN11097030	CR02bin2	Pseudomonadota bacterium
GCA_004357735.1	SMVN00000000	SAMN11097028	N074bin38	Pseudomonadota bacterium
GCA_004357665.1	SMVM00000000	SAMN11097027	N075bin61	Pseudomonadota bacterium
GCA_004357675.1	SMVO00000000	SAMN11097029	CR04bin18	Pseudomonadota bacterium
GCA_004566135.1	SMVB00000000	SAMN11095934	N075	marine sediment metagenome
GCA_004566115.1	SMVA00000000	SAMN11095933	N074	marine sediment metagenome
GCA_004566095.1	SMUY00000000	SAMN11095931	CR04	marine sediment metagenome
GCA_004566075.1	SMUX00000000	SAMN11095930	CR02	marine sediment metagenome
GCA_004566055.1	SMUZ00000000	SAMN11095932	CR05	marine sediment metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	7
Data volume, Mbytes	4545

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marine sediment metagenome

Mariana and Kermadec trench Metagenomes

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