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Accession: PRJNA427141 ID: 427141

Bacteria

E. coli and Acinetobacter lwoffii isolated from pig faeces

Molecular investigation of microorganisms sampled from different stages of production on a ESBL-positive commercial pig farm

Accession	PRJNA427141
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Pereira do Vale A et al., "Draft Genome Sequences of Three Novel Acinetobacter Isolates from an Irish Commercial Pig Farm.", Microbiol Resour Announc, 2019 Sep 26;8(39)
Submission	Registration date: 10-Jul-2019 University College Dublin
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	10452
WGS master	17
SRA Experiments	20
Protein Sequences	81515
Publications
PubMed	1
PMC	1
Other datasets
BioSample	20
Assembly	17

Assembly details:

Assembly level

Number of Assemblies

Scaffold

Contig

11
6
17

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_006864105.1		SMTB00000000	SAMN08224478	RF14B	Acinetobacter sp. RF14B
GCA_007570885.1		VLSQ00000000	SAMN08224479	RF15A	Acinetobacter sp. RF15A
GCA_007558235.1		VLSR00000000	SAMN08224480	RF15B	Acinetobacter sp. RF15B
GCA_008365185.1		VTWB00000000	SAMN08224474	RF9	Escherichia coli
GCA_008365165.1		VTVY00000000	SAMN08224471	RF7A	Escherichia coli
GCA_008365175.1		VTWD00000000	SAMN08224476	RF12A	Escherichia coli
GCA_008365155.1		VTWF00000000	SAMN08224481	RF16A	Escherichia coli
GCA_008365055.1		VTVU00000000	SAMN08224466	RF5A	Escherichia coli
GCA_008365075.1		VTVS00000000	SAMN08224464	RF2B	Escherichia coli
GCA_008365085.1		VTVV00000000	SAMN08224467	RF6A1	Escherichia coli
GCA_008365065.1		VTVW00000000	SAMN08224468	RF6A2	Escherichia coli
GCA_008365015.1		VTVT00000000	SAMN08224465	RF2C	Escherichia coli
GCA_008365025.1		VTVX00000000	SAMN08224469	RF6B	Escherichia coli
GCA_008364995.1		VTWA00000000	SAMN08224473	RF8B	Escherichia coli
GCA_008364975.1		VTVZ00000000	SAMN08224472	RF8A	Escherichia coli
GCA_008364935.1		VTWC00000000	SAMN08224475	RF11	Escherichia coli
GCA_008364875.1		VTWE00000000	SAMN08224477	RF14A	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	8
Data volume, Mbytes	3561

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E. coli and Acinetobacter lwoffii isolated from pig faeces

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