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Links from Protein

Accession: PRJNA531449 ID: 531449

egg metagenome

Binning of metagenomic data collected from Lagria villosa beetle eggs

Metagenomic sequences originating from Lagria villosa beetle eggs were assembled and binned into putative genomes. Putative genome DBSCAN_round1_3 is submitted here.
AccessionPRJNA531449
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismegg metagenome[Taxonomy ID: 2202140]
unclassified sequences; metagenomes; ecological metagenomes; egg metagenome
SubmissionRegistration date: 22-Jan-2020
University of Wisconsin, Madison
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3732
WGS master19
SRA Experiments1
Protein Sequences70197
Other datasets
BioSample22
Assembly19
Assembly details:
Assembly levelNumber of Assemblies
8
11
19
AssemblyLevelWGSBioSampleInfraspecies IdTaxonomy
GCA_009912575.1ContigWNDP00000000SAMN12995584
cluster_DBSCAN_round1_3
GCA_009914575.1ScaffoldWNEB00000000SAMN12995597
cluster_DBSCAN_round_6_18
GCA_009911875.1ContigWNDN00000000SAMN11358502
LvStB
GCA_009912275.1ContigWITE00000000SAMN12995582
Lv-StA
GCA_009912215.1ContigWNDV00000000SAMN12995590
cluster_DBSCAN_round4_0
GCA_009914595.1ContigWNEA00000000SAMN12995596
cluster_DBSCAN_round6_14
GCA_009914115.1ScaffoldWNDW00000000SAMN12995591
cluster_DBSCAN_round4_12
GCA_009914615.1ContigWNDX00000000SAMN12995592
cluster_DBSCAN_round4_6
GCA_009912395.1ContigWNDO00000000SAMN12995583
cluster_DBSCAN_round1_2
GCA_009912175.1ScaffoldWNDQ00000000SAMN12995585
cluster_DBSCAN_round2_3
GCA_009911955.1ScaffoldWNEE00000000SAMN12995600
cluster_DBSCAN_round8_1
GCA_009911885.1ContigWNED00000000SAMN12995599
cluster_DBSCAN_round7_14
GCA_009912315.1ContigWNDR00000000SAMN12995586
cluster_DBSCAN_round34_1
GCA_009912135.1ScaffoldWNDT00000000SAMN12995588
cluster_DBSCAN_round43_4
GCA_009912515.1ScaffoldWNDU00000000SAMN12995589
cluster_DBSCAN_round44_0
GCA_009911925.1ScaffoldWNEC00000000SAMN12995598
cluster_DBSCAN_round7_0
GCA_009912235.1ContigWNDS00000000SAMN12995587
cluster_DBSCAN_round3_0
GCA_009911995.1ScaffoldWNDZ00000000SAMN12995594
cluster_DBSCAN_round5_3
GCA_009914555.1ContigWNDY00000000SAMN12995593
cluster_DBSCAN_round5_1
SRA Data Details
ParameterValue
Data volume, Gbases21
Data volume, Mbytes10632

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