egg metagenome (ID 531449) - BioProject

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Accession: PRJNA531449 ID: 531449

egg metagenome

Binning of metagenomic data collected from Lagria villosa beetle eggs

Metagenomic sequences originating from Lagria villosa beetle eggs were assembled and binned into putative genomes. Putative genome DBSCAN_round1_3 is submitted here.

Accession	PRJNA531449
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	egg metagenome[Taxonomy ID: 2202140] unclassified sequences; metagenomes; ecological metagenomes; egg metagenome
Submission	Registration date: 22-Jan-2020 University of Wisconsin, Madison
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3732
WGS master	19
SRA Experiments	1
Protein Sequences	70197
Other datasets
BioSample	22
Assembly	19

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

8
11
19

Assembly	WGS	BioSample	Infraspecies Id	Taxonomy
GCA_009912575.1	WNDP00000000	SAMN12995584	cluster_DBSCAN_round1_3	Acinetobacter bereziniae
GCA_009911875.1	WNDN00000000	SAMN11358502	LvStB	Burkholderia gladioli
GCA_009912275.1	WITE00000000	SAMN12995582	Lv-StA	Burkholderia gladioli
GCA_009914575.1	WNEB00000000	SAMN12995597	cluster_DBSCAN_round_6_18	Burkholderia gladioli
GCA_009912215.1	WNDV00000000	SAMN12995590	cluster_DBSCAN_round4_0	Burkholderia lata
GCA_009914595.1	WNEA00000000	SAMN12995596	cluster_DBSCAN_round6_14	Burkholderia plantarii
GCA_009914115.1	WNDW00000000	SAMN12995591	cluster_DBSCAN_round4_12	Delftia tsuruhatensis
GCA_009914615.1	WNDX00000000	SAMN12995592	cluster_DBSCAN_round4_6	Herbaspirillum frisingense
GCA_009912395.1	WNDO00000000	SAMN12995583	cluster_DBSCAN_round1_2	Luteibacter sp.
GCA_009912175.1	WNDQ00000000	SAMN12995585	cluster_DBSCAN_round2_3	Paracidovorax wautersii
GCA_009911955.1	WNEE00000000	SAMN12995600	cluster_DBSCAN_round8_1	Pseudomonas citronellolis
GCA_009911885.1	WNED00000000	SAMN12995599	cluster_DBSCAN_round7_14	Pseudomonas delhiensis
GCA_009912315.1	WNDR00000000	SAMN12995586	cluster_DBSCAN_round34_1	Pseudomonas fluorescens
GCA_009912135.1	WNDT00000000	SAMN12995588	cluster_DBSCAN_round43_4	Pseudomonas sp.
GCA_009912515.1	WNDU00000000	SAMN12995589	cluster_DBSCAN_round44_0	Pseudomonas sp.
GCA_009911925.1	WNEC00000000	SAMN12995598	cluster_DBSCAN_round7_0	Stenotrophomonas maltophilia
GCA_009912235.1	WNDS00000000	SAMN12995587	cluster_DBSCAN_round3_0	Stenotrophomonas maltophilia
GCA_009911995.1	WNDZ00000000	SAMN12995594	cluster_DBSCAN_round5_3	Variovorax sp.
GCA_009914555.1	WNDY00000000	SAMN12995593	cluster_DBSCAN_round5_1	Xylophilus sp.

SRA Data Details

Parameter	Value
Data volume, Gbases	21
Data volume, Mbytes	10632

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egg metagenome

Binning of metagenomic data collected from Lagria villosa beetle eggs

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