Rattus rattus isolate:New Zealand (ID 612505) - BioProject

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Accession: PRJNA612505 ID: 612505

Rattus rattus isolate:New Zealand (black rat)

Rattus rattus isolate:New Zealand RefSeq Genome sequencing

See Genome Information for Rattus rattus

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32 additional projects are related by organism.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA574245). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA612505
Data Type	RefSeq Genome sequencing
Scope	Monoisolate
Organism	Rattus rattus[Taxonomy ID: 10117] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus; Rattus rattus
Publications (total 3) Less...	Robins JH et al., "Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes.", Mol Phylogenet Evol, 2008 Nov;49(2):460-6 More... Robins JH et al., "Dating of divergences within the Rattus genus phylogeny using whole mitochondrial genomes.", Mol Phylogenet Evol, 2008 Nov;49(2):460-6 Shou C et al., "Molecular cloning of cDNAs encoding a guanine-nucleotide-releasing factor for Ras p21.", Nature, 1992 Jul 23;358(6384):351-4 Rovner AS et al., "Complete cDNA sequence of rat atrial myosin light chain 1: patterns of expression during development and with hypertension.", Nucleic Acids Res, 1990 Mar 25;18(6):1581-6 Less...
Submission	Registration date: 4-Mar-2020 CSIRO Applied Genomics Initiative
Relevance	Environmental
Locus Tag Prefix	HAX57

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	41780
Transcript	39588
Protein Sequences	35462
Publications
PubMed	3
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_011064425.1	Chromosome	JAAIVD000000000	21	SAMN12855339	Rattus rattus

Related GenBank Project

PRJNA574245 : Rattus rattus isolate:New Zealand Genome sequencing and assembly

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Rattus rattus isolate:New Zealand (black rat)

Rattus rattus isolate:New Zealand RefSeq Genome sequencing

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