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Accession: PRJNA600556 ID: 600556

viral metagenome

Virome of wild and zoo birds

We describe here the metagenomics-derived virome in cloacal swabs of different wild and zoo birds from eight provinces of China.

Accession	PRJNA600556
Data Type	Genome sequencing
Scope	Multiisolate
Organism	viral metagenome[Taxonomy ID: 1070528] unclassified sequences; metagenomes; organismal metagenomes; viral metagenome
Publications (total 3) Less...	Dai Z et al., "Unveiling the Virome of Wild Birds: Exploring CRESS-DNA Viral Dark Matter.", Genome Biol Evol, 2024 Oct 9;16(10) More... Dai Z et al., "Unveiling the Virome of Wild Birds: Exploring CRESS-DNA Viral Dark Matter.", Genome Biol Evol, 2024 Oct 9;16(10) Lu X et al., "Highly diverse RNA viruses and phage sequences concealed within birds.", Microbiol Spectr, 2024 Jul 2;12(7):e0080224 Dai Z et al., "Parvovirus dark matter in the cloaca of wild birds.", Gigascience, 2022 Dec 28;12 Less...
Submission	Registration date: 10-Jan-2020 Jiangsu University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	3686
Genomic DNA	899
Genomic RNA	2787
SRA Experiments	314
Protein Sequences	4935
Publications
PubMed	3
PMC	3
Other datasets
BioSample	1
Assembly	7

Genome assemblies, organelles and plasmids:

Assembly GCA_018591135.1 :

Name	RefSeq	GenBank
	NC_076480.1	MN928911.1

Assembly GCA_018591145.1 :

Name	RefSeq	GenBank
	NC_076481.1	MN928918.1

Assembly GCA_018591155.1 :

Name	RefSeq	GenBank
	NC_076482.1	MN928919.1

Assembly GCA_031167835.1 :

Name	GenBank
	MT138240.1

Assembly GCA_031199765.1 :

Name	GenBank
	MN917674.1

Assembly GCA_031199775.1 :

Name	GenBank
	MN917675.1

Assembly GCA_031199785.1 :

Name	GenBank
	MT138212.1

SRA Data Details

Parameter	Value
Data volume, Gbases	154
Data volume, Mbytes	57568

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viral metagenome
viral metagenome
Virome of wild and zoo birds

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