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Accession: PRJNA331825 ID: 331825

Sorghum bicolor cultivar:Rio (sorghum)

Sorghum bicolor cultivar:Rio Genome sequencing and assembly

See Genome Information for Sorghum bicolor
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6680 additional projects are related by organism.
Genome sequencing of sorghum bicolor strain to identify and characterize the biological pathways and their regulators that enable sucrose accumulation in sweet sorghum
AccessionPRJNA331825
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismSorghum bicolor[Taxonomy ID: 4558]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae; Sorghum; Sorghum bicolor
PublicationsCooper EA et al., "A new reference genome for Sorghum bicolor reveals high levels of sequence similarity between sweet and grain genotypes: implications for the genetics of sugar metabolism.", BMC Genomics, 2019 May 27;20(1):420
SubmissionRegistration date: 1-Dec-2020
DOE Joint Genome Institute
Related Resources
RelevanceComparative Analysis
Locus Tag PrefixBDA96
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)3841
WGS master1
SRA Experiments53
Protein Sequences41048
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_015952705.1ChromosomeJADDXV000000000
10
SAMN05444726
Sorghum bicolor
SRA Data Details
ParameterValue
Data volume, Gbases164
Data volume, Mbytes96836

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  • GOLD: Gp0136731 [Genomes On Line Database]
    GOLD: Gp0136731
    Genomes On Line Database

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