ID 691727 - BioProject

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Accession: PRJNA691727 ID: 691727

blaOXA-48-like genome architecture among carbapenemase-producing Escherichia coli and Klebsiella pneumoniae in the Netherlands

OXA-48-type of carbapenem hydrolyzing enzymes encoded by blaOXA-48-like genes from transmissible plasmids or chromosomes of Escherichia coli and Klebsiella pneumoniae have spread world-wide and are of concern. More...

Accession	PRJNA691727
Data Type	Raw sequence reads
Scope	Multispecies
Submission	Registration date: 13-Jan-2021 Dutch CPE surveillance Study Group - National Institute for Public Health and the Environment
Relevance	surveillance

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	223
Protein Sequences	214142
Other datasets
BioSample	223
Assembly	44

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Chromosome

Total

36
8
44

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_016776385.1	1	SAMN17373176	RIVM_C018220	Escherichia coli
GCA_016776365.1	1	SAMN17373177	RIVM_C018249	Escherichia coli
GCA_016776345.1	1	SAMN17373178	RIVM_C018404	Escherichia coli
GCA_016776325.1	1	SAMN17373183	RIVM_C018583	Escherichia coli
GCA_016776305.1	1	SAMN17373172	RIVM_C017887	Escherichia coli
GCA_016776285.1	1	SAMN17373191	RIVM_C028620	Escherichia coli
GCA_016776265.1	1	SAMN17373182	RIVM_C018576	Escherichia coli
GCA_016776245.1	1	SAMN17373186	RIVM_C028536	Escherichia coli
GCA_016776225.1	1	SAMN17373192	RIVM_C028724	Escherichia coli
GCA_016776205.1	1	SAMN17373194	RIVM_C028803	Escherichia coli
GCA_016776185.1	1	SAMN17373193	RIVM_C028786	Escherichia coli
GCA_016776165.1	1	SAMN17373189	RIVM_C029033	Escherichia coli
GCA_016776145.1	1	SAMN17373187	RIVM_C028568	Escherichia coli
GCA_016776125.1	1	SAMN17373185	RIVM_C028497	Escherichia coli
GCA_016776105.1	1	SAMN17373195	RIVM_C029042	Escherichia coli
GCA_016776085.1	1	SAMN17373190	RIVM_C028613	Escherichia coli
GCA_016776065.1	1	SAMN17373173	RIVM_C017997	Escherichia coli
GCA_016776045.1	1	SAMN17373180	RIVM_C018563	Escherichia coli
GCA_016776025.1	1	SAMN17373200	RIVM_C030197	Escherichia coli
GCA_016776005.1	1	SAMN17373199	RIVM_C029494	Escherichia coli
GCA_016775985.1	1	SAMN17373203	RIVM_C030371	Escherichia coli
GCA_016775965.1	1	SAMN17373196	RIVM_C029951	Escherichia coli
GCA_016775945.1	1	SAMN17373188	RIVM_C029020	Escherichia coli
GCA_016775925.1	1	SAMN17373198	RIVM_C029324	Escherichia coli
GCA_016775905.1	1	SAMN17373204	RIVM_C030443	Escherichia coli
GCA_016775885.1	1	SAMN17373205	RIVM_C030453	Escherichia coli
GCA_016775865.1	1	SAMN17373202	RIVM_C030300	Escherichia coli
GCA_016775845.1	1	SAMN17373181	RIVM_C018567	Escherichia coli
GCA_016775825.1	1	SAMN17373197	RIVM_C029952	Escherichia coli
GCA_016775805.1	1	SAMN17373201	RIVM_C030256	Escherichia coli
GCA_016779865.1	1	SAMN17373184	RIVM_C018699	Escherichia coli
GCA_016780575.1	1	SAMN17497583	RIVM_C018707	Escherichia coli
GCA_016780415.1	1	SAMN17373165	RIVM_C012087	Escherichia coli
GCA_016780285.1	1	SAMN17373164	RIVM_C011532	Escherichia coli
GCA_016801555.1	1	SAMN17373169	RIVM_C014187	Escherichia coli
GCA_016801535.1	1	SAMN17373168	RIVM_C014115	Escherichia coli
GCA_016801515.1	1	SAMN17373175	RIVM_C018150	Escherichia coli
GCA_016801475.1	1	SAMN17373174	RIVM_C036689	Escherichia coli
GCA_016801445.1	1	SAMN17373166	RIVM_C014046	Escherichia coli
GCA_016801595.1	1	SAMN17373163	RIVM_C010151	Escherichia coli
GCA_016801575.1	1	SAMN17373171	RIVM_C015657	Klebsiella pneumoniae
GCA_016801495.1	1	SAMN17373179	RIVM_C018500	Klebsiella pneumoniae
GCA_016780145.1	1	SAMN17373170	RIVM_C015043	Klebsiella pneumoniae
GCA_016780025.1	1	SAMN17373167	RIVM_C014073	Klebsiella pneumoniae

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blaOXA-48-like genome architecture among carbapenemase-producing Escherichia coli and Klebsiella pneumoniae in the Netherlands

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