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Accession: PRJEB34894 ID: 629173

Genomic and Transcriptomic study of Symbiodinium Isolates

Genome comparison of Symbiodinium isolates

We generated genome data for seven isolates in the genus Symbiodinium, the most ancient lineage in family Symbiodiniaceae. More...

Accession	PRJEB34894
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Publications	González-Pech RA et al., "Comparison of 15 dinoflagellate genomes reveals extensive sequence and structural divergence in family Symbiodiniaceae and genus Symbiodinium.", BMC Biol, 2021 Apr 13;19(1):73
Submission	Registration date: 29-Apr-2020 Australian Centre for Ecogenomics, School of Chemistry and Molecular Biosciences, University of Queensland
Locus Tag Prefix	STRI2592

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	95251
WGS master	7
SRA Experiments	115
Protein Sequences	253012
Publications
PubMed	1
PMC	1
Other datasets
BioSample	115
Assembly	7

Assembly details:

Assembly level

Number of Assemblies

Scaffold

7
7

Assembly	Level	WGS	BioSample	Taxonomy
GCA_905231925.1		CAJNJV000000000	SAMEA6358980	Symbiodinium microadriaticum
GCA_905221605.1		CAJNDS000000000	SAMEA7230740	Symbiodinium natans
GCA_905231915.1		CAJNJA000000000	SAMEA6359004	Symbiodinium necroappetens
GCA_905231905.1		CAJNIZ000000000	SAMEA6359027	Symbiodinium pilosum
GCA_905221635.1		CAJNDV000000000	SAMEA6359014	Symbiodinium sp. CCMP2456
GCA_905221615.1		CAJNDT000000000	SAMEA7230703	Symbiodinium sp. CCMP2592
GCA_905221625.1		CAJNDU000000000	SAMEA6358992	Symbiodinium sp. KB8

SRA Data Details

Parameter	Value
Data volume, Gbases	2,895
Data volume, Tbytes	1.26

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