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Links from Protein

Accession: PRJNA668689 ID: 668689

Alosa alosa (allis shad)

Alosa alosa Genome sequencing and assembly

See Genome Information for Alosa alosa
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5 additional projects are related by organism.
A chromosome-scale genome assembly of Allis shad, Alosa alosa
AccessionPRJNA668689
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismAlosa alosa[Taxonomy ID: 278164]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Alosa; Alosa alosa
PublicationsLavoué S et al., "Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences.", Mol Phylogenet Evol, 2007 Jun;43(3):1096-105
Grants
  • "Investissement d’avenir" (Grant ID ANR-10-INBS-09, Agence Nationale de la recherche)
  • "Evolution of genes and genomes after whole genome duplication (GenoFish)" (Grant ID ANR-16-CE12-0035, Agence Nationale de la recherche)
SubmissionRegistration date: 26-Mar-2021
GenoFish
- INRAE (Fish Physiology and Genomics laboratory)
RelevanceEvolution
Locus Tag PrefixAALO
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)197
WGS master1
SRA Experiments16
Protein Sequences26435
Publications
PubMed1
Other datasets
BioSample4
Assembly1
Assembly details:
AssemblyLevelWGSChrsBioSampleTaxonomy
GCA_017589495.2ChromosomeJADWDJ000000000
24
SAMN16418510
Alosa alosa
SRA Data Details
ParameterValue
Data volume, Gbases279
Data volume, Tbytes0.14
Related RefSeq Project
PRJNA834759 : Alosa alosa RefSeq Genome sequencing

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