ID 575161 - BioProject

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Accession: PRJNA575161 ID: 575161

sedimentary microbial diversity

microbial diversity of a sediment core from Pearl river estuary

Accession	PRJNA575161
Data Type	Raw sequence reads
Scope	Multispecies
Publications	Wang W et al., "Vertical Stratification of Dissolved Organic Matter Linked to Distinct Microbial Communities in Subtropic Estuarine Sediments.", Front Microbiol, 2021;12:697860
Submission	Registration date: 1-Oct-2019 Tongji University

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	217
SRA Experiments	44
Protein Sequences	592552
Publications
PubMed	1
PMC	1
Other datasets
BioSample	255
Assembly	217

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Total

217
217

Assembly	Chrs	BioSample	Isolate	Taxonomy
GCA_020352575.1	1	SAMN17669685	bin686	Acidimicrobiia bacterium
GCA_020350445.1	1	SAMN17669649	bin48	Acidobacteriota bacterium
GCA_020350085.1	1	SAMN17669660	bin529	Acidobacteriota bacterium
GCA_020349885.1	1	SAMN17669665	bin57	Acidobacteriota bacterium
GCA_020344355.1	1	SAMN17669543	bin1136	Anaerolineaceae bacterium
GCA_020350285.1	1	SAMN17669658	bin52	Anaerolineaceae bacterium
GCA_020344275.1	1	SAMN17669547	bin1159	Anaerolineae bacterium
GCA_020343875.1	1	SAMN17669554	bin12	Anaerolineales bacterium
GCA_020344195.1	1	SAMN17669551	bin1184	Anaerolineales bacterium
GCA_020354045.1	1	SAMN17669727	bin917	Anaerolineales bacterium
GCA_020354555.1	1	SAMN17669718	bin88	Armatimonadota bacterium
GCA_020344235.1	1	SAMN17669549	bin117	Armatimonadota bacterium
GCA_020353115.1	1	SAMN17669679	bin64	Bacteroidales bacterium
GCA_020354785.1	1	SAMN17669712	bin82	Bacteroidales bacterium
GCA_020346185.1	1	SAMN17669590	bin200	Betaproteobacteria bacterium
GCA_020349925.1	1	SAMN17669663	bin550	Betaproteobacteria bacterium
GCA_020354125.1	1	SAMN17669723	bin90	Betaproteobacteria bacterium
GCA_020350345.1	1	SAMN17669655	bin51	Bradyrhizobium sp.
GCA_020348765.1	1	SAMN17669612	bin300	Burkholderiales bacterium
GCA_020354665.1	1	SAMN17669713	bin83	Burkholderiales bacterium
GCA_020355165.1	1	SAMN17669705	bin78	Burkholderiales bacterium
GCA_020343735.1	1	SAMN17669556	bin1228	Candidatus Aenigmatarchaeota archaeon
GCA_020343635.1	1	SAMN17669561	bin1329	Candidatus Aenigmatarchaeota archaeon
GCA_020343575.1	1	SAMN17669564	bin1364	Candidatus Aenigmatarchaeota archaeon
GCA_020355205.1	1	SAMN17669703	bin771	Candidatus Aerophobus sp.
GCA_020355945.1	1	SAMN17669739	bin99	Candidatus Aminicenantes bacterium
GCA_020344415.1	1	SAMN17669540	bin112	Candidatus Aminicenantes bacterium
GCA_020348385.1	1	SAMN17669615	bin34	Candidatus Aminicenantes bacterium
GCA_020349325.1	1	SAMN17669608	bin290	Candidatus Aminicenantes bacterium
GCA_020350305.1	1	SAMN17669657	bin519	Candidatus Bathyarchaeota archaeon
GCA_020350385.1	1	SAMN17669652	bin490	Candidatus Bathyarchaeota archaeon
GCA_020348365.1	1	SAMN17669616	bin345	Candidatus Bathyarchaeota archaeon
GCA_020348865.1	1	SAMN17669611	bin30	Candidatus Bathyarchaeota archaeon
GCA_020348945.1	1	SAMN17669606	bin28	Candidatus Bathyarchaeota archaeon
GCA_020348285.1	1	SAMN17669620	bin363	Candidatus Bathyarchaeota archaeon
GCA_020351305.1	1	SAMN17669635	bin42	Candidatus Bathyarchaeota archaeon
GCA_020352645.1	1	SAMN17669683	bin67	Candidatus Bathyarchaeota archaeon
GCA_020352535.1	1	SAMN17669687	bin695	Candidatus Bathyarchaeota archaeon
GCA_020354065.1	1	SAMN17669726	bin91	Candidatus Bathyarchaeota archaeon
GCA_020344715.1	1	SAMN17669537	bin1093	Candidatus Bathyarchaeota archaeon
GCA_020345945.1	1	SAMN17669592	bin22	Candidatus Bathyarchaeota archaeon
GCA_020345645.1	1	SAMN17669600	bin257	Candidatus Bathyarchaeota archaeon
GCA_020346825.1	1	SAMN17669574	bin1445	Candidatus Bathyarchaeota archaeon
GCA_020346605.1	1	SAMN17669581	bin16	Candidatus Bathyarchaeota archaeon
GCA_020346725.1	1	SAMN17669579	bin1484	Candidatus Bathyarchaeota archaeon
GCA_020344435.1	1	SAMN17669539	bin1106	Candidatus Bathyarchaeota archaeon
GCA_020341775.1	1	SAMN17669530	bin106	Candidatus Bathyarchaeota archaeon
GCA_020356305.1	1	SAMN17669730	bin95	Candidatus Bathyarchaeota archaeon
GCA_020355125.1	1	SAMN17669707	bin796	Candidatus Bathyarchaeota archaeon
GCA_020354575.1	1	SAMN17669717	bin87	Candidatus Bathyarchaeota archaeon
GCA_020354535.1	1	SAMN17669719	bin882	Candidatus Bathyarchaeota archaeon
GCA_020344315.1	1	SAMN17669545	bin115	Candidatus Bathyarchaeum sp.
GCA_020350845.1	1	SAMN17669641	bin446	Candidatus Bipolaricaulota bacterium
GCA_020348885.1	1	SAMN17669610	bin3	Candidatus Coatesbacteria bacterium
GCA_020356085.1	1	SAMN17669733	bin961	Candidatus Coatesbacteria bacterium
GCA_020349905.1	1	SAMN17669664	bin56	Candidatus Eisenbacteria bacterium
GCA_020348965.1	1	SAMN17669605	bin272	Candidatus Heimdallarchaeota archaeon
GCA_020351745.1	1	SAMN17669701	bin76	Candidatus Heimdallarchaeota archaeon
GCA_020353515.1	1	SAMN17669671	bin6	Candidatus Heimdallarchaeota archaeon
GCA_020346265.1	1	SAMN17669586	bin18	Candidatus Hydrogenedentota bacterium
GCA_020352495.1	1	SAMN17669689	bin70	Candidatus Latescibacterota bacterium
GCA_020349025.1	1	SAMN17669602	bin260	Candidatus Latescibacterota bacterium
GCA_020356045.1	1	SAMN17669735	bin977	Candidatus Latescibacterota bacterium
GCA_020355065.1	1	SAMN17669710	bin809	Candidatus Neomarinimicrobiota bacterium
GCA_020354025.1	1	SAMN17669728	bin92	Candidatus Neomarinimicrobiota bacterium
GCA_020346745.1	1	SAMN17669578	bin1478	Candidatus Neomarinimicrobiota bacterium
GCA_020346285.1	1	SAMN17669585	bin17	Candidatus Omnitrophota bacterium
GCA_020341815.1	1	SAMN17669528	bin103	Candidatus Omnitrophota bacterium
GCA_020343495.1	1	SAMN17669568	bin140	Candidatus Omnitrophota bacterium
GCA_020343695.1	1	SAMN17669558	bin1292	Candidatus Omnitrophota bacterium
GCA_020352775.1	1	SAMN17669682	bin66	Candidatus Omnitrophota bacterium
GCA_020354945.1	1	SAMN17669711	bin81	Candidatus Omnitrophota bacterium
GCA_020348985.1	1	SAMN17669604	bin27	Candidatus Thorarchaeota archaeon
GCA_020355105.1	1	SAMN17669708	bin8	Candidatus Thorarchaeota archaeon
GCA_020343615.1	1	SAMN17669562	bin1342	Candidatus Woesearchaeota archaeon
GCA_020344055.1	1	SAMN17669552	bin119	Candidatus Zixiibacteriota bacterium
GCA_020343475.1	1	SAMN17669569	bin142	Candidatus Zixiibacteriota bacterium
GCA_020341875.1	1	SAMN17669526	bin1014	Candidatus Zixiibacteriota bacterium
GCA_020344395.1	1	SAMN17669541	bin1124	Candidatus Zixiibacteriota bacterium
GCA_020345705.1	1	SAMN17669599	bin25	Candidatus Zixiibacteriota bacterium
GCA_020346225.1	1	SAMN17669588	bin19	Candidatus Zixiibacteriota bacterium
GCA_020348905.1	1	SAMN17669609	bin295	Candidatus Zixiibacteriota bacterium
GCA_020348065.1	1	SAMN17669623	bin38	Candidatus Zixiibacteriota bacterium
GCA_020351995.1	1	SAMN17669692	bin72	Candidatus Zixiibacteriota bacterium
GCA_020350745.1	1	SAMN17669646	bin467	Chloroflexota bacterium
GCA_020353135.1	1	SAMN17669678	bin634	Chloroflexota bacterium
GCA_020349245.1	1	SAMN17669601	bin26	Chloroflexota bacterium
GCA_020346705.1	1	SAMN17669580	bin156	Chloroflexota bacterium
GCA_020346965.1	1	SAMN17669572	bin1433	Chloroflexota bacterium
GCA_020354105.1	1	SAMN17669724	bin905	Chloroflexota bacterium
GCA_020351875.1	1	SAMN17669695	bin74	Chromatiales bacterium
GCA_020341715.1	1	SAMN17669533	bin1073	Dehalococcoidales bacterium
GCA_020342155.1	1	SAMN17669523	bin10	Dehalococcoidales bacterium
GCA_020343555.1	1	SAMN17669565	bin137	Dehalococcoidales bacterium
GCA_020354275.1	1	SAMN17669721	bin896	Dehalococcoidales bacterium
GCA_020356025.1	1	SAMN17669736	bin98	Dehalococcoidia bacterium
GCA_020343755.1	1	SAMN17669555	bin1219	Dehalococcoidia bacterium
GCA_020346305.1	1	SAMN17669584	bin168	Dehalococcoidia bacterium
GCA_020344295.1	1	SAMN17669546	bin1158	Dehalococcoidia bacterium
GCA_020351795.1	1	SAMN17669699	bin748	Dehalococcoidia bacterium
GCA_020351185.1	1	SAMN17669636	bin423	Dehalococcoidia bacterium
GCA_020352375.1	1	SAMN17669690	bin708	Dehalococcoidia bacterium
GCA_020353235.1	1	SAMN17669673	bin61	Dehalococcoidia bacterium
GCA_020353155.1	1	SAMN17669677	bin63	Deltaproteobacteria bacterium
GCA_020353215.1	1	SAMN17669674	bin617	Deltaproteobacteria bacterium
GCA_020350905.1	1	SAMN17669638	bin435	Deltaproteobacteria bacterium
GCA_020351915.1	1	SAMN17669693	bin73	Deltaproteobacteria bacterium
GCA_020349945.1	1	SAMN17669662	bin55	Deltaproteobacteria bacterium
GCA_020350325.1	1	SAMN17669656	bin514	Deltaproteobacteria bacterium
GCA_020347625.1	1	SAMN17669630	bin40	Deltaproteobacteria bacterium
GCA_020347605.1	1	SAMN17669631	bin407	Deltaproteobacteria bacterium
GCA_020348625.1	1	SAMN17669613	bin319	Deltaproteobacteria bacterium
GCA_020345765.1	1	SAMN17669595	bin23	Deltaproteobacteria bacterium
GCA_020346465.1	1	SAMN17669582	bin162	Deltaproteobacteria bacterium
GCA_020346205.1	1	SAMN17669589	bin197	Deltaproteobacteria bacterium
GCA_020344255.1	1	SAMN17669548	bin116	Deltaproteobacteria bacterium
GCA_020342025.1	1	SAMN17669525	bin101	Deltaproteobacteria bacterium
GCA_020355085.1	1	SAMN17669709	bin80	Deltaproteobacteria bacterium
GCA_020355145.1	1	SAMN17669706	bin79	Deltaproteobacteria bacterium
GCA_020354645.1	1	SAMN17669714	bin85	Deltaproteobacteria bacterium
GCA_020349865.1	1	SAMN17669666	bin575	Desulfobacteraceae bacterium
GCA_020348305.1	1	SAMN17669619	bin36	Desulfobacterales bacterium
GCA_020351815.1	1	SAMN17669698	bin747	Desulfobacterales bacterium
GCA_020353355.1	1	SAMN17669672	bin60	Desulfobacterales bacterium
GCA_020353555.1	1	SAMN17669669	bin589	Desulfobacterales bacterium
GCA_020346785.1	1	SAMN17669576	bin1454	Desulfobacterales bacterium
GCA_020347085.1	1	SAMN17669596	bin233	Desulfobacterales bacterium
GCA_020345745.1	1	SAMN17669597	bin239	Desulfobacterales bacterium
GCA_020345785.1	1	SAMN17669594	bin225	Desulfobacterales bacterium
GCA_020347945.1	1	SAMN17669624	bin383	Flavobacteriaceae bacterium
GCA_020347545.1	1	SAMN17669634	bin416	Flavobacteriaceae bacterium
GCA_020346245.1	1	SAMN17669587	bin181	Flavobacteriaceae bacterium
GCA_020344335.1	1	SAMN17669544	bin114	Gammaproteobacteria bacterium
GCA_020341735.1	1	SAMN17669532	bin107	Gammaproteobacteria bacterium
GCA_020347685.1	1	SAMN17669627	bin397	Gammaproteobacteria bacterium
GCA_020354435.1	1	SAMN17669720	bin89	Gammaproteobacteria bacterium
GCA_020344755.1	1	SAMN17669536	bin109	Gemmatimonadales bacterium
GCA_020344375.1	1	SAMN17669542	bin113	Gemmatimonadota bacterium
GCA_020344215.1	1	SAMN17669550	bin118	Gemmatimonadota bacterium
GCA_020346845.1	1	SAMN17669573	bin1440	Gemmatimonadota bacterium
GCA_020344015.1	1	SAMN17669553	bin1194	Gemmatimonadota bacterium
GCA_020348925.1	1	SAMN17669607	bin29	Gemmatimonadota bacterium
GCA_020350425.1	1	SAMN17669650	bin486	Gemmatimonadota bacterium
GCA_020351775.1	1	SAMN17669700	bin75	Gemmatimonadota bacterium
GCA_020351855.1	1	SAMN17669696	bin741	Gemmatimonadota bacterium
GCA_020350785.1	1	SAMN17669644	bin464	Gemmatimonadota bacterium
GCA_020354005.1	1	SAMN17669729	bin94	Ignavibacterium sp.
GCA_020348345.1	1	SAMN17669617	bin352	Methanobacteriota archaeon
GCA_020347645.1	1	SAMN17669629	bin4	Methanobacteriota archaeon
GCA_020347565.1	1	SAMN17669633	bin41	Methanobacteriota archaeon
GCA_020345725.1	1	SAMN17669598	bin24	Methanobacteriota archaeon
GCA_020347705.1	1	SAMN17669626	bin396	Methanomassiliicoccales archaeon
GCA_020351445.1	1	SAMN17669653	bin5	Myxococcales bacterium
GCA_020354595.1	1	SAMN17669716	bin861	Myxococcales bacterium
GCA_020343535.1	1	SAMN17669566	bin1391	Nitrospinaceae bacterium
GCA_020346765.1	1	SAMN17669577	bin1476	Nitrospiraceae bacterium
GCA_020347665.1	1	SAMN17669628	bin398	Nitrospiraceae bacterium
GCA_020347785.1	1	SAMN17669625	bin387	Nitrospiraceae bacterium
GCA_020349825.1	1	SAMN17669667	bin581	Nitrospiraceae bacterium
GCA_020354155.1	1	SAMN17669722	bin899	Nitrospiraceae bacterium
GCA_020356065.1	1	SAMN17669734	bin97	Nitrospiraceae bacterium
GCA_020355985.1	1	SAMN17669738	bin988	Nitrospirota bacterium
GCA_020348185.1	1	SAMN17669622	bin371	Nitrospirota bacterium
GCA_020351835.1	1	SAMN17669697	bin746	Nitrospirota bacterium
GCA_020352895.1	1	SAMN17669681	bin658	Phycisphaerales bacterium
GCA_020352215.1	1	SAMN17669691	bin71	Phycisphaerales bacterium
GCA_020352515.1	1	SAMN17669688	bin7	Phycisphaerales bacterium
GCA_020353195.1	1	SAMN17669675	bin621	Phycisphaerales bacterium
GCA_020348265.1	1	SAMN17669621	bin37	Phycisphaerales bacterium
GCA_020348325.1	1	SAMN17669618	bin358	Phycisphaerales bacterium
GCA_020350565.1	1	SAMN17669648	bin470	Phycisphaerales bacterium
GCA_020350805.1	1	SAMN17669643	bin463	Phycisphaerales bacterium
GCA_020346325.1	1	SAMN17669583	bin164	Phycisphaerales bacterium
GCA_020345805.1	1	SAMN17669593	bin220	Phycisphaerales bacterium
GCA_020344555.1	1	SAMN17669538	bin11	Phycisphaerales bacterium
GCA_020343675.1	1	SAMN17669559	bin1297	Phycisphaerales bacterium
GCA_020344865.1	1	SAMN17669535	bin1080	Planctomycetota bacterium
GCA_020346805.1	1	SAMN17669575	bin1449	Planctomycetota bacterium
GCA_020350405.1	1	SAMN17669651	bin49	Planctomycetota bacterium
GCA_020351025.1	1	SAMN17669637	bin43	Planctomycetota bacterium
GCA_020344955.1	1	SAMN17669534	bin108	Promethearchaeota archaeon
GCA_020343655.1	1	SAMN17669560	bin132	Promethearchaeota archaeon
GCA_020347585.1	1	SAMN17669632	bin408	Pseudomonadota bacterium
GCA_020354085.1	1	SAMN17669725	bin909	Pseudomonadota bacterium
GCA_020350765.1	1	SAMN17669645	bin465	Ralstonia sp.
GCA_020356105.1	1	SAMN17669732	bin96	Rhodospirillales bacterium
GCA_020353535.1	1	SAMN17669670	bin59	Spirochaetaceae bacterium
GCA_020342115.1	1	SAMN17669524	bin100	Spirochaetota bacterium
GCA_020346125.1	1	SAMN17669591	bin204	Syntrophobacterales bacterium
GCA_020343715.1	1	SAMN17669557	bin1246	Thermoplasmata archaeon
GCA_020350865.1	1	SAMN17669640	bin445	Thermoplasmata archaeon
GCA_020351895.1	1	SAMN17669694	bin738	Thermoplasmata archaeon
GCA_020348445.1	1	SAMN17669614	bin33	Thermoplasmata archaeon
GCA_020356005.1	1	SAMN17669737	bin983	Thermoplasmata archaeon
GCA_020356125.1	1	SAMN17669731	bin958	Thermoplasmatales archaeon
GCA_020350365.1	1	SAMN17669654	bin50	Thermoplasmatales archaeon
GCA_020350825.1	1	SAMN17669642	bin45	Thermoplasmatales archaeon
GCA_020343515.1	1	SAMN17669567	bin14	Thermoplasmatales archaeon
GCA_020341795.1	1	SAMN17669529	bin105	Thermoplasmatales archaeon
GCA_020341835.1	1	SAMN17669527	bin102	Thiotrichales bacterium
GCA_020353175.1	1	SAMN17669676	bin623	Thiotrichales bacterium
GCA_020354625.1	1	SAMN17669715	bin86	Trueperaceae bacterium
GCA_020355185.1	1	SAMN17669704	bin779	archaeon
GCA_020343435.1	1	SAMN17669571	bin1429	archaeon
GCA_020352595.1	1	SAMN17669684	bin676	bacterium
GCA_020350885.1	1	SAMN17669639	bin44	bacterium
GCA_020350725.1	1	SAMN17669647	bin47	bacterium
GCA_020350205.1	1	SAMN17669659	bin522	bacterium
GCA_020349005.1	1	SAMN17669603	bin264	bacterium
GCA_020349685.1	1	SAMN17669668	bin582	bacterium
GCA_020349965.1	1	SAMN17669661	bin53	candidate division WOR-3 bacterium
GCA_020353055.1	1	SAMN17669680	bin65	candidate division WOR-3 bacterium
GCA_020352555.1	1	SAMN17669686	bin69	candidate division WOR-3 bacterium
GCA_020343455.1	1	SAMN17669570	bin1428	candidate division WOR-3 bacterium
GCA_020343595.1	1	SAMN17669563	bin1351	candidate division WOR-3 bacterium
GCA_020341755.1	1	SAMN17669531	bin1061	candidate division WOR-3 bacterium
GCA_020355325.1	1	SAMN17669702	bin77	candidate division WOR-3 bacterium

SRA Data Details

Parameter	Value
Data volume, Gbases	377
Data volume, Tbytes	0.12

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sedimentary microbial diversity

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