Phytophthora ramorum isolate:PR-102 (ID 738483) - BioProject

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Accession: PRJNA738483 ID: 738483

Phytophthora ramorum isolate:PR-102 (sudden oak death agent)

Phytophthora ramorum NA1 genome sequencing and assembly

See Genome Information for Phytophthora ramorum

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This project is a component of the Phytophthora ramorum NA1 genome sequencing and assembly

This project is a component of the Comparative genomics of Phytophthora ramorum

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2 additional projects are components of the Phytophthora ramorum NA1 genome sequencing and assembly.

2 additional projects are components of the Comparative genomics of Phytophthora ramorum.

26 additional projects are related by organism.

Phytophthora ramorum is the causal agent of sudden oak death in West Coast forests and currently two clonal lineages, NA1 and EU1, cause epidemics in forests. More...

Accession	PRJNA738483
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Phytophthora ramorum[Taxonomy ID: 164328] Eukaryota; Sar; Stramenopiles; Oomycota; Peronosporales; Peronosporaceae; Phytophthora; Phytophthora ramorum
Publications	Carleson NC et al., "High-Quality, Phased Genomes of Phytophthora ramorum Clonal Lineages NA1 and EU1.", Mol Plant Microbe Interact, 2022 Apr;35(4):360-363 Published online: Carleson N et al., "High-Quality, Phased Genomes of Phytophthora ramorum Clonal Lineages NA1 and EU1", Molecular Plant-Microbe Interactions®, 2022;35(4):360-363
Submission	Registration date: 8-Nov-2021 USDA ARS
Relevance	Agricultural
Locus Tag Prefix	KRP23

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	28
WGS master	1
SRA Experiments	1
Protein Sequences	15506
Publications
PubMed	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_020800215.1	Scaffold	JAICDV000000000	SAMN19730089	Phytophthora ramorum

SRA Data Details

Parameter	Value
Data volume, Gbases	20
Data volume, Mbytes	4980

Related RefSeq Project

PRJNA1149793 : Phytophthora ramorum NA1 RefSeq BioProject

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Phytophthora ramorum isolate:PR-102 (sudden oak death agent)

Phytophthora ramorum NA1 genome sequencing and assembly

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