ID 561159 - BioProject

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Accession: PRJNA561159 ID: 561159

Genomes of Agrobacterium tumefaciens isolated from California walnut orchards

These are the genomes of Agrobacterium tumefaciens strains isolated from crown galls of walnuts.

Accession	PRJNA561159
Data Type	Genome sequencing
Scope	Multispecies
Grants	"Integrated Disease Management Strategies for Woody Perennial Species" (Grant ID 2032-22000-016-00D, United States Department of Agriculture)
Submission	Registration date: 20-Aug-2019 USDA-ARS
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (Genomic DNA)	134
SRA Experiments	56
Protein Sequences	148711
Other datasets
BioSample	30
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Total

28
28

Assembly	Chrs	BioSample	Strain	Taxonomy
GCA_025560525.1	6	SAMN12610082	Kin001	Agrobacterium fabrum
GCA_025560665.1	5	SAMN12610078	CC001	Agrobacterium pusense
GCA_025560605.1	11	SAMN12610079	cl001	Agrobacterium tumefaciens
GCA_025560585.1	4	SAMN12610080	Gle001	Agrobacterium tumefaciens
GCA_025560485.1	7	SAMN12610084	Kin002	Agrobacterium tumefaciens
GCA_025560465.1	4	SAMN12610085	Kin003	Agrobacterium tumefaciens
GCA_025560445.1	4	SAMN12610086	SJ001	Agrobacterium tumefaciens
GCA_025560705.1	5	SAMN12610076	But001	Agrobacterium tumefaciens
GCA_025560685.1	4	SAMN12610077	But002	Agrobacterium tumefaciens
GCA_025560545.1	5	SAMN12610081	Gle002	Agrobacterium tumefaciens
GCA_025560405.1	4	SAMN12610087	SJ002	Agrobacterium tumefaciens
GCA_025560345.1	3	SAMN12610088	SJ003	Agrobacterium tumefaciens
GCA_025560305.1	4	SAMN12610089	Sta002	Agrobacterium tumefaciens
GCA_025560285.1	4	SAMN12610090	Sta003	Agrobacterium tumefaciens
GCA_025560265.1	6	SAMN12610091	Sta004	Agrobacterium tumefaciens
GCA_025560245.1	4	SAMN12610092	Sta005	Agrobacterium tumefaciens
GCA_025560225.1	5	SAMN12610093	Sut001	Agrobacterium tumefaciens
GCA_025560205.1	5	SAMN12610094	Sut002	Agrobacterium tumefaciens
GCA_025560165.1	6	SAMN12610095	Teh001	Agrobacterium tumefaciens
GCA_025560125.1	5	SAMN12610096	Teh002	Agrobacterium tumefaciens
GCA_025560045.1	3	SAMN12610098	Tul002	Agrobacterium tumefaciens
GCA_025560025.1	4	SAMN12610100	Tul003	Agrobacterium tumefaciens
GCA_025560005.1	4	SAMN12610101	Tul004	Agrobacterium tumefaciens
GCA_025559945.1	4	SAMN12610102	Yol001	Agrobacterium tumefaciens
GCA_025559885.1	4	SAMN12610103	Yol002	Agrobacterium tumefaciens
GCA_025560085.1	5	SAMN12610097	Tul001	Agrobacterium tumefaciens
GCA_025559845.1	4	SAMN12610104	Yub001	Agrobacterium tumefaciens
GCA_025559825.1	5	SAMN12610105	Yub002	Agrobacterium tumefaciens

SRA Data Details

Parameter	Value
Data volume, Gbases	36
Data volume, Mbytes	28288

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Genomes of Agrobacterium tumefaciens isolated from California walnut orchards

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