Ammospiza caudacuta isolate:bAmmCau1 (ID 994575) - BioProject

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Accession: PRJNA994575 ID: 994575

Ammospiza caudacuta isolate:bAmmCau1

Ammospiza caudacuta isolate:bAmmCau1 RefSeq Genome sequencing and assembly

See Genome Information for Ammospiza caudacuta

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This project is a component of the Ammodramus caudacutus (saltmarsh sparrow) genome, bAmmCau1

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3 additional projects are related by organism.

2 additional projects are components of the Ammodramus caudacutus (saltmarsh sparrow) genome, bAmmCau1.

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA839452). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA994575
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Ammospiza caudacuta[Taxonomy ID: 2857398] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passerellidae; Ammospiza; Ammospiza caudacuta
Publications	Lu X et al., "Metagenomic analysis reveals high diversity of gut viromes in yaks (Bos grunniens) from the Qinghai-Tibet Plateau.", Commun Biol, 2024 Sep 6;7(1):1097 Rhie A et al., "Towards complete and error-free genome assemblies of all vertebrate species.", Nature, 2021 Apr;592(7856):737-746
Submission	Registration date: 17-Jan-2023 Vertebrate Genomes Project - G10K - Rockefeller Vertebrate Genome Lab
Related Resources	Adrienne Kovach
Relevance	Model Organism
Locus Tag Prefix	Q2T79

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	27851
Genomic DNA	1
Transcript	27528
Protein Sequences	25890
Publications
PubMed	2
PMC	2
Other datasets
BioSample	2
Assembly	1

Assembly details:

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Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCF_027887145.1	Chromosome	JAQIHB000000000	40	SAMN28421630	Ammospiza caudacuta

Related GenBank Project

PRJNA839452 : Ammospiza caudacuta (saltmarsh sparrow) genome, bAmmCau1, primary haplotype

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Ammospiza caudacuta isolate:bAmmCau1

Ammospiza caudacuta isolate:bAmmCau1 RefSeq Genome sequencing and assembly

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