Salmonella enterica (ID 417863) - BioProject

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Accession: PRJNA417863 ID: 417863

Salmonella enterica

Genomes of Salmonella enterica isolated by the CFIA_Genomes de Salmonella enterica isolees par l'ACIA

See Genome Information for Salmonella enterica

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This project is a component of the Canadian Food Inspection Agency Genome Trakr Project / Projet Genome Trakr de l'Agence canadienne d'inspection des aliments

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6 additional projects are components of the Canadian Food Inspection Agency Genome Trakr Project / Projet Genome Trakr de l'Agence canadienne d'inspection des aliments.

3960 additional projects are related by organism.

Whole-genome sequence of Salmonella enterica strains isolated by the Canadian Food Inspection Agency (CFIA) from food, animal feed, fertilizer and environmental samples.

Accession	PRJNA417863
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Salmonella enterica[Taxonomy ID: 28901] Bacteria; Pseudomonadati; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Salmonella; Salmonella enterica
Publications	Nadin-Davis S et al., "An Unusual Salmonella Enteritidis Strain Carrying a Modified Virulence Plasmid Lacking the prot6e Gene Represents a Geographically Widely Distributed Lineage.", Front Microbiol, 2020;11:1322
Submission	Registration date: 29-Sep-2019 Canadian Food Inspection Agency
Related Resources	Canadian Food Inspection Agency Agence canadienne d'inspection des aliments
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	44
WGS master	6
Genomic DNA	17
SRA Experiments	853
Protein Sequences	49603
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1084
Assembly	11

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

5
6
11

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_004798765.1		4	SAMN10501886	CFIAFB20170119	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_004768665.1		4	SAMN10501888	CFIAFB20170121	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_004768625.1		4	SAMN10501887	CFIAFB20170120	Salmonella enterica subsp. enterica serovar Senftenberg
GCA_008728015.1	VYYH00000000		SAMN12709146	2006D1274-20-15	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008727985.1	VYYE00000000		SAMN12709149	2011OTH031-8-1	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008727965.1	VYYG00000000		SAMN12709147	2008D015-15-1	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008727955.1	VYYF00000000		SAMN12709148	2008OTH027-7-4	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008727855.1	VYYD00000000		SAMN12709150	2012OTH012-9-1	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_008727915.1	VYYC00000000		SAMN12709151	2014OTH007-19-16	Salmonella enterica subsp. enterica serovar Enteritidis
GCA_031198825.1		3	SAMN13334506	CFIAFB20140150	Salmonella enterica
GCA_030863765.1		2	SAMN11030399	CFIAFB20160237	Salmonella enterica subsp. enterica serovar 4,12:i:-

SRA Data Details

Parameter	Value
Data volume, Gbases	510
Data volume, Tbytes	0.32

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Salmonella enterica

Genomes of Salmonella enterica isolated by the CFIA_Genomes de Salmonella enterica isolees par l'ACIA

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