Calidris pugnax isolate:Ruff (ID 305421) - BioProject

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Accession: PRJNA305421 ID: 305421

Calidris pugnax isolate:Ruff (ruff)

Calidris pugnax isolate:Ruff RefSeq Genome sequencing and assembly

The reference sequence (RefSeq) genome assembly is derived from the submitted GenBank assembly (see linked project PRJNA281024). Annotation provided on the RefSeq genomic records is based on NCBI annotation pipeline.

Accession	PRJNA305421
Data Type	RefSeq Genome sequencing and assembly
Scope	Monoisolate
Organism	Calidris pugnax[Taxonomy ID: 198806] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Charadriiformes; Scolopacidae; Calidris; Calidris pugnax
Publications	Lowe TM et al., "tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.", Nucleic Acids Res, 1997 Mar 1;25(5):955-64
Submission	Registration date: 4-Nov-2015 BGI
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	38009
Transcript	34256
Protein Sequences	30889
Publications
PubMed	1
PMC	1
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCF_001431845.1	Scaffold	LDEH00000000	SAMN03491621	Calidris pugnax

Related GenBank Project

PRJNA281024 : Calidris pugnax isolate:Ruff Genome sequencing and assembly

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