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Links from Protein

Accession: PRJNA278302 ID: 278302

terrestrial metagenome

Alaska oil reservoir Metagenome

Hydrocarbon reservoirs are major sites of methane production and carbon turnover, processes with significant impacts on energy resources and global biogeochemical cycles. More...
AccessionPRJNA278302
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismterrestrial metagenome[Taxonomy ID: 1348798]
unclassified sequences; metagenomes; ecological metagenomes; terrestrial metagenome
PublicationsHu P et al., "Genome-Resolved Metagenomic Analysis Reveals Roles for Candidate Phyla and Other Microbial Community Members in Biogeochemical Transformations in Oil Reservoirs.", mBio, 2016 Jan 19;7(1):e01669-15
SubmissionRegistration date: 8-Jan-2016
Lawrence Berkeley National Lab
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)13145
WGS master80
SRA Experiments6
Protein Sequences120680
Publications
PubMed1
PMC1
Other datasets
BioSample80
Assembly80
Genome assemblies, organelles and plasmids:
Assembly GCA_001507695.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZP00000000
Assembly GCA_001507705.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZQ00000000
Assembly GCA_001507715.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZR00000000
Assembly GCA_001507815.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZS00000000
Assembly GCA_001507825.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZT00000000
Assembly GCA_001507835.1 :
NameGenBank
Whole Genome Shotgun AssemblyLDZU00000000
Assembly GCA_001507855.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEN00000000
Assembly GCA_001507875.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEP00000000
Assembly GCA_001507915.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGER00000000
Assembly GCA_001507935.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGET00000000
Assembly GCA_001507955.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEU00000000
Assembly GCA_001507975.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEW00000000
Assembly GCA_001507995.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEY00000000
Assembly GCA_001508005.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEZ00000000
Assembly GCA_001508035.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFA00000000
Assembly GCA_001508055.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFC00000000
Assembly GCA_001508065.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFD00000000
Assembly GCA_001508095.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFE00000000
Assembly GCA_001508115.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFF00000000
Assembly GCA_001508125.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFG00000000
Assembly GCA_001508155.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFI00000000
Assembly GCA_001508175.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFJ00000000
Assembly GCA_001508185.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFK00000000
Assembly GCA_001508215.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFO00000000
Assembly GCA_001508235.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFR00000000
Assembly GCA_001508255.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFU00000000
Assembly GCA_001508275.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFV00000000
Assembly GCA_001508295.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFH00000000
Assembly GCA_001508305.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFW00000000
Assembly GCA_001508335.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFX00000000
Assembly GCA_001508355.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFY00000000
Assembly GCA_001508375.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFZ00000000
Assembly GCA_001508395.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGB00000000
Assembly GCA_001508405.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGG00000000
Assembly GCA_001508435.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGH00000000
Assembly GCA_001508455.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGJ00000000
Assembly GCA_001508475.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGK00000000
Assembly GCA_001508485.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGN00000000
Assembly GCA_001508515.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGP00000000
Assembly GCA_001508535.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGQ00000000
Assembly GCA_001508555.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGS00000000
Assembly GCA_001508575.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGX00000000
Assembly GCA_001508595.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHA00000000
Assembly GCA_001508615.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHB00000000
Assembly GCA_001508635.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHC00000000
Assembly GCA_001508655.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHD00000000
Assembly GCA_001508665.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHE00000000
Assembly GCA_001508695.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHF00000000
Assembly GCA_001508715.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHI00000000
Assembly GCA_001508735.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEO00000000
Assembly GCA_001508745.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEQ00000000
Assembly GCA_001508775.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGES00000000
Assembly GCA_001508795.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEV00000000
Assembly GCA_001508815.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGEX00000000
Assembly GCA_001508835.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFB00000000
Assembly GCA_001508855.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFL00000000
Assembly GCA_001508875.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFM00000000
Assembly GCA_001508895.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFN00000000
Assembly GCA_001508915.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFP00000000
Assembly GCA_001508935.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFQ00000000
Assembly GCA_001508955.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFS00000000
Assembly GCA_001508975.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGE00000000
Assembly GCA_001508995.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGF00000000
Assembly GCA_001509005.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGL00000000
Assembly GCA_001509035.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGO00000000
Assembly GCA_001509055.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGT00000000
Assembly GCA_001509075.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGU00000000
Assembly GCA_001509095.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGV00000000
Assembly GCA_001509115.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGW00000000
Assembly GCA_001509135.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGZ00000000
Assembly GCA_001509155.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHG00000000
Assembly GCA_001509175.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGHH00000000
Assembly GCA_001509255.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGD00000000
Assembly GCA_001509265.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGI00000000
Assembly GCA_001509275.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGC00000000
Assembly GCA_001509285.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGA00000000
Assembly GCA_001509335.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGY00000000
Assembly GCA_001509345.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGM00000000
Assembly GCA_001509375.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGFT00000000
Assembly GCA_001509385.1 :
NameGenBank
Whole Genome Shotgun AssemblyLGGR00000000
SRA Data Details
ParameterValue
Data volume, Gbases86
Data volume, Mbytes53096

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