Campylobacter (ID 355268) - BioProject

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Accession: PRJNA355268 ID: 355268

Campylobacter

GenomeTrakr Project: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory

See Genome Information for Campylobacter jejuni

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This project is a component of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli

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633 additional projects are related by organism.

31 additional projects are components of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli.

Whole genome sequencing of cultured Campylobacter jejuni as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA355268
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Campylobacter[Taxonomy ID: 194] Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter
Submission	Registration date: 23-Apr-2019 FDA
Related Resources	Ohio Department of Agriculture \| Animal Disease Diagnostic Laboratory
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	106
SRA Experiments	170
Other datasets
BioSample	169
Assembly	106

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

31
31

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004822205.1	AABIEQ000000000	SAMN10086813	OH-18-18281-4B	Campylobacter coli
GCA_040500595.1	ABTHGM000000000	SAMN42273939	AG24-0138	Campylobacter jejuni
GCA_021017215.1	ABEBVW000000000	SAMN23522940	AG21-0328	Campylobacter jejuni
GCA_015442945.1	AAXFXV000000000	SAMN16781623	jejuni	Campylobacter jejuni
GCA_015442985.1	AAXFXW000000000	SAMN16781624	jejuni	Campylobacter jejuni
GCA_016741115.1	AAYULB000000000	SAMN17284313	AG20-0155	Campylobacter jejuni
GCA_004819105.1	AABICA000000000	SAMN09917871	OH-18-15321-1	Campylobacter jejuni
GCA_004819285.1	AABIBW000000000	SAMN09917867	OH-18-15124	Campylobacter jejuni
GCA_004819725.1	AABIBV000000000	SAMN09784513	AG18-0002	Campylobacter jejuni
GCA_004819825.1	AABIBU000000000	SAMN09784510	AG18-0003	Campylobacter jejuni
GCA_004819965.1	AABIBX000000000	SAMN09917873	OH-18-15321-3	Campylobacter jejuni
GCA_004820785.1	AABIBY000000000	SAMN10236229	OH-18-19951-2	Campylobacter jejuni
GCA_004821845.1	AABIEM000000000	SAMN10086690	OH-18-18281-4A	Campylobacter jejuni
GCA_005012275.1	AABUVN000000000	SAMN06068091	B16-25748	Campylobacter jejuni
GCA_004980325.1	AABSLT000000000	SAMN07823464	OH-17-20373-3	Campylobacter jejuni
GCA_004980225.1	AABSLM000000000	SAMN07823471	OH-17-20148-3	Campylobacter jejuni
GCA_006360355.1	AAFGFD000000000	SAMN12056379	AG19-0242	Campylobacter jejuni
GCA_006363635.1	AAFGFA000000000	SAMN12056298	AG19-0243	Campylobacter jejuni
GCA_005214915.1	AACILJ000000000	SAMN07709890	B1720373-3	Campylobacter jejuni
GCA_005181485.1	AACFZD000000000	SAMN07710399	B1720148-3	Campylobacter jejuni
GCA_005070465.1	AABYFI000000000	SAMN08040359	OH-17-25327-1	Campylobacter jejuni
GCA_005163145.1	AACETV000000000	SAMN08025804	OH-17-24433-1	Campylobacter jejuni
GCA_005280055.1	AACMPB000000000	SAMN11604753	AG19-0213	Campylobacter jejuni
GCA_007740535.1	AAISWQ000000000	SAMN12360764	AG19-0246	Campylobacter jejuni
GCA_010356185.1	AANOJU000000000	SAMN14009917	AG20-0003	Campylobacter jejuni
GCA_010311965.1	AANLGL000000000	SAMN13976753	AG20-0001	Campylobacter jejuni
GCA_011501645.1	AAQEOM000000000	SAMN14331103	AG20-0013	Campylobacter jejuni
GCA_005372045.1	AACTFV000000000	SAMN09850702	OH-18-17333	Campylobacter upsaliensis
GCA_005152925.1	AACEAK000000000	SAMN08040358	OH-17-25327-2	Campylobacter upsaliensis
GCA_010359165.1	AANOPX000000000	SAMN14009914	AG20-0004	Campylobacter upsaliensis
GCA_010358225.1	AANOOH000000000	SAMN14008856	AG20-0002	Campylobacter upsaliensis

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	23085

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Campylobacter

GenomeTrakr Project: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory

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