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Accession: PRJNA354433 ID: 354433

Bacteria

Bacteria Genome sequencing and assembly

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This project is a component of the FDA CVM
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6 additional projects are components of the FDA CVM.
Whole genome sequencing of the type strains of bacterial species associated with fish disease.
AccessionPRJNA354433
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 12-Jul-2017
FDA
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2215
WGS master23
SRA Experiments21
Protein Sequences94043
Other datasets
BioSample26
Assembly23
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Total
23
23
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_002943675.1ScaffoldMUGO00000000SAMN06049055
DSM 21068
Chryseobacterium piscicola
GCA_002943655.1ScaffoldMUGP00000000SAMN06049054
DSM 17126
Chryseobacterium shigense
GCA_002217235.1ScaffoldMUGQ00000000SAMN06049046
ATCC 11947
Flavobacterium aquatile LMG 4008 = ATCC 11947
GCA_002217195.1ScaffoldMUGR00000000SAMN06049052
DSM 18293
Flavobacterium aquidurense
GCA_002222055.1ScaffoldMUGS00000000SAMN06049049
DSM 24704
Flavobacterium araucananum
GCA_002217205.1ScaffoldMUGT00000000SAMN06049065
ATCC 35035
Flavobacterium branchiophilum NBRC 15030 = ATCC 35035
GCA_002530755.1ScaffoldPCMW00000000SAMN06049062
ATCC 35036
Flavobacterium branchiophilum
GCA_002530675.1ScaffoldPCMX00000000SAMN06049064
ATCC 23463
Flavobacterium columnare NBRC 100251 = ATCC 23463
GCA_002217245.1ScaffoldMUGU00000000SAMN06049043
ATCC 23463
Flavobacterium columnare NBRC 100251 = ATCC 23463
GCA_002217275.1ScaffoldMUGV00000000SAMN06049050
DSM 15937
Flavobacterium frigidimaris
GCA_002217285.1ScaffoldMUGW00000000SAMN06049051
DSM 18292
Flavobacterium hercynium
GCA_002217315.1ScaffoldMUGX00000000SAMN06049058
ATCC 51468
Flavobacterium hibernum
GCA_002217335.1ScaffoldMUGY00000000SAMN06049047
ATCC 29551
Flavobacterium hydatis
GCA_002221975.1ScaffoldMUGZ00000000SAMN06049048
ATCC 17061
Flavobacterium johnsoniae UW101
GCA_002217355.1ScaffoldMUHA00000000SAMN06049060
CCUG 59446
Flavobacterium oncorhynchi
GCA_002217365.1ScaffoldMUHB00000000SAMN06049057
ATCC 19366
Flavobacterium pectinovorum
GCA_002222045.1ScaffoldMUHC00000000SAMN06049066
CCUG 60099
Flavobacterium piscis
GCA_002217395.1ScaffoldMUHD00000000SAMN06049068
CCUG 60112
Flavobacterium plurextorum
GCA_002217405.1ScaffoldMUHE00000000SAMN06049063
ATCC 49418
Flavobacterium psychrophilum DSM 3660 = ATCC 49418
GCA_002217435.1ScaffoldMUHF00000000SAMN06049053
DSM 21791
Flavobacterium reichenbachii
GCA_002217475.1ScaffoldMUHH00000000SAMN06049067
CCUG 60100
Flavobacterium tructae
GCA_002217445.1ScaffoldMUHG00000000SAMN06049056
ATCC BAA-2541
Flavobacterium tructae
GCA_002943685.1ScaffoldMUHI00000000SAMN06049061
ATCC 13525
Pseudomonas fluorescens
SRA Data Details
ParameterValue
Data volume, Gbases11
Data volume, Mbytes6892

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