Campylobacter (ID 355268) - BioProject

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Accession: PRJNA355268 ID: 355268

Campylobacter

GenomeTrakr Project: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory

See Genome Information for Campylobacter jejuni

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This project is a component of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli

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628 additional projects are related by organism.

31 additional projects are components of the GenomeTrakr umbrella project for Campylobacter jejuni and Campylobacter coli.

Whole genome sequencing of cultured Campylobacter jejuni as part of the US Food and Drug Administration's WGS surveillance effort for the rapid traceback of foodborne pathogens.

Accession	PRJNA355268
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Campylobacter[Taxonomy ID: 194] Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter
Submission	Registration date: 23-Apr-2019 FDA
Related Resources	Ohio Department of Agriculture \| Animal Disease Diagnostic Laboratory
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	105
SRA Experiments	169
Other datasets
BioSample	168
Assembly	105

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

105
105

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_004822205.1	AABIEQ000000000	SAMN10086813	OH-18-18281-4B	Campylobacter coli
GCA_021017215.1	ABEBVW000000000	SAMN23522940	AG21-0328	Campylobacter jejuni
GCA_015442985.1	AAXFXW000000000	SAMN16781624	jejuni	Campylobacter jejuni
GCA_015442945.1	AAXFXV000000000	SAMN16781623	jejuni	Campylobacter jejuni
GCA_016741115.1	AAYULB000000000	SAMN17284313	AG20-0155	Campylobacter jejuni
GCA_010311965.1	AANLGL000000000	SAMN13976753	AG20-0001	Campylobacter jejuni
GCA_010356185.1	AANOJU000000000	SAMN14009917	AG20-0003	Campylobacter jejuni
GCA_011501645.1	AAQEOM000000000	SAMN14331103	AG20-0013	Campylobacter jejuni
GCA_032816945.1	ABOAVH000000000	SAMN35758836	AG23-0005	Campylobacter jejuni
GCA_032816925.1	ABOAVI000000000	SAMN35758872	AG23-0041	Campylobacter jejuni
GCA_032816905.1	ABOAVG000000000	SAMN35758871	AG23-0040	Campylobacter jejuni
GCA_032816885.1	ABOAVF000000000	SAMN35758870	AG23-0039	Campylobacter jejuni
GCA_032816865.1	ABOAVE000000000	SAMN35758869	AG23-0038	Campylobacter jejuni
GCA_032816845.1	ABOAVD000000000	SAMN35758868	AG23-0037	Campylobacter jejuni
GCA_032816825.1	ABOAVC000000000	SAMN35758867	AG23-0036	Campylobacter jejuni
GCA_032816805.1	ABOAVB000000000	SAMN35758866	AG23-0035	Campylobacter jejuni
GCA_032817525.1	ABOAWI000000000	SAMN35758897	AG23-0066	Campylobacter jejuni
GCA_032817505.1	ABOAWC000000000	SAMN35758891	AG23-0060	Campylobacter jejuni
GCA_032817485.1	ABOAWB000000000	SAMN35758889	AG23-0058	Campylobacter jejuni
GCA_032817465.1	ABOAWF000000000	SAMN35758893	AG23-0062	Campylobacter jejuni
GCA_032817445.1	ABOAWD000000000	SAMN35758838	AG23-0007	Campylobacter jejuni
GCA_032817425.1	ABOAVY000000000	SAMN35758887	AG23-0056	Campylobacter jejuni
GCA_032817405.1	ABOAWL000000000	SAMN35758899	AG23-0068	Campylobacter jejuni
GCA_032817385.1	ABOAWJ000000000	SAMN35758896	AG23-0065	Campylobacter jejuni
GCA_032817365.1	ABOAWK000000000	SAMN35758898	AG23-0067	Campylobacter jejuni
GCA_032817345.1	ABOAWG000000000	SAMN35758894	AG23-0063	Campylobacter jejuni
GCA_032817325.1	ABOAWH000000000	SAMN35758895	AG23-0064	Campylobacter jejuni
GCA_032817305.1	ABOAWE000000000	SAMN35758892	AG23-0061	Campylobacter jejuni
GCA_032817285.1	ABOAWA000000000	SAMN35758890	AG23-0059	Campylobacter jejuni
GCA_032817265.1	ABOAVZ000000000	SAMN35758888	AG23-0057	Campylobacter jejuni
GCA_032817245.1	ABOAVX000000000	SAMN35758886	AG23-0055	Campylobacter jejuni
GCA_032817225.1	ABOAVV000000000	SAMN35758884	AG23-0053	Campylobacter jejuni
GCA_032817205.1	ABOAVW000000000	SAMN35758885	AG23-0054	Campylobacter jejuni
GCA_032817185.1	ABOAVU000000000	SAMN35758883	AG23-0052	Campylobacter jejuni
GCA_032817165.1	ABOAVT000000000	SAMN35758837	AG23-0006	Campylobacter jejuni
GCA_032817145.1	ABOAVS000000000	SAMN35758882	AG23-0051	Campylobacter jejuni
GCA_032817125.1	ABOAVR000000000	SAMN35758881	AG23-0050	Campylobacter jejuni
GCA_032817105.1	ABOAVP000000000	SAMN35758879	AG23-0048	Campylobacter jejuni
GCA_032817085.1	ABOAVO000000000	SAMN35758878	AG23-0047	Campylobacter jejuni
GCA_032817065.1	ABOAVQ000000000	SAMN35758880	AG23-0049	Campylobacter jejuni
GCA_032817045.1	ABOAVN000000000	SAMN35758877	AG23-0046	Campylobacter jejuni
GCA_032817025.1	ABOAVM000000000	SAMN35758876	AG23-0045	Campylobacter jejuni
GCA_032817005.1	ABOAVK000000000	SAMN35758874	AG23-0043	Campylobacter jejuni
GCA_032816985.1	ABOAVL000000000	SAMN35758875	AG23-0044	Campylobacter jejuni
GCA_032816965.1	ABOAVJ000000000	SAMN35758873	AG23-0042	Campylobacter jejuni
GCA_032817725.1	ABOAWV000000000	SAMN35758841	AG23-0010	Campylobacter jejuni
GCA_032816585.1	ABOAUR000000000	SAMN35758857	AG23-0026	Campylobacter jejuni
GCA_032816505.1	ABOAUM000000000	SAMN35758834	AG23-0003	Campylobacter jejuni
GCA_032816045.1	ABOATV000000000	SAMN35758832	AG23-0001	Campylobacter jejuni
GCA_032816525.1	ABOAUO000000000	SAMN35758854	AG23-0023	Campylobacter jejuni
GCA_032816565.1	ABOAUP000000000	SAMN35758855	AG23-0024	Campylobacter jejuni
GCA_032816475.1	ABOAUL000000000	SAMN35758852	AG23-0021	Campylobacter jejuni
GCA_032816545.1	ABOAUN000000000	SAMN35758853	AG23-0022	Campylobacter jejuni
GCA_032816375.1	ABOAUK000000000	SAMN35758851	AG23-0020	Campylobacter jejuni
GCA_032816345.1	ABOAUJ000000000	SAMN35758850	AG23-0019	Campylobacter jejuni
GCA_032816305.1	ABOAUH000000000	SAMN35758848	AG23-0017	Campylobacter jejuni
GCA_032816325.1	ABOAUI000000000	SAMN35758849	AG23-0018	Campylobacter jejuni
GCA_032816205.1	ABOAUD000000000	SAMN35758844	AG23-0013	Campylobacter jejuni
GCA_032816285.1	ABOAUG000000000	SAMN35758847	AG23-0016	Campylobacter jejuni
GCA_032816165.1	ABOAUE000000000	SAMN35758845	AG23-0014	Campylobacter jejuni
GCA_032816225.1	ABOAUF000000000	SAMN35758846	AG23-0015	Campylobacter jejuni
GCA_032816105.1	ABOAUC000000000	SAMN35758843	AG23-0012	Campylobacter jejuni
GCA_032816085.1	ABOAUB000000000	SAMN35758842	AG23-0011	Campylobacter jejuni
GCA_032816065.1	ABOAUA000000000	SAMN35758833	AG23-0002	Campylobacter jejuni
GCA_032817705.1	ABOAWU000000000	SAMN35758840	AG23-0009	Campylobacter jejuni
GCA_032817685.1	ABOAWT000000000	SAMN35758906	AG23-0075	Campylobacter jejuni
GCA_032817665.1	ABOAWS000000000	SAMN35758905	AG23-0074	Campylobacter jejuni
GCA_032817645.1	ABOAWQ000000000	SAMN35758903	AG23-0072	Campylobacter jejuni
GCA_032817605.1	ABOAWP000000000	SAMN35758902	AG23-0071	Campylobacter jejuni
GCA_032817625.1	ABOAWR000000000	SAMN35758904	AG23-0073	Campylobacter jejuni
GCA_032817565.1	ABOAWN000000000	SAMN35758900	AG23-0069	Campylobacter jejuni
GCA_032817585.1	ABOAWO000000000	SAMN35758839	AG23-0008	Campylobacter jejuni
GCA_032817545.1	ABOAWM000000000	SAMN35758901	AG23-0070	Campylobacter jejuni
GCA_032816765.1	ABOAUZ000000000	SAMN35758864	AG23-0033	Campylobacter jejuni
GCA_032816785.1	ABOAVA000000000	SAMN35758865	AG23-0034	Campylobacter jejuni
GCA_032816725.1	ABOAUX000000000	SAMN35758862	AG23-0031	Campylobacter jejuni
GCA_032816745.1	ABOAUY000000000	SAMN35758863	AG23-0032	Campylobacter jejuni
GCA_032816705.1	ABOAUW000000000	SAMN35758835	AG23-0004	Campylobacter jejuni
GCA_032816685.1	ABOAUT000000000	SAMN35758861	AG23-0030	Campylobacter jejuni
GCA_032816665.1	ABOAUV000000000	SAMN35758860	AG23-0029	Campylobacter jejuni
GCA_032816605.1	ABOAUQ000000000	SAMN35758856	AG23-0025	Campylobacter jejuni
GCA_032816645.1	ABOAUS000000000	SAMN35758858	AG23-0027	Campylobacter jejuni
GCA_032816625.1	ABOAUU000000000	SAMN35758859	AG23-0028	Campylobacter jejuni
GCA_007740535.1	AAISWQ000000000	SAMN12360764	AG19-0246	Campylobacter jejuni
GCA_006360355.1	AAFGFD000000000	SAMN12056379	AG19-0242	Campylobacter jejuni
GCA_006363635.1	AAFGFA000000000	SAMN12056298	AG19-0243	Campylobacter jejuni
GCA_004819105.1	AABICA000000000	SAMN09917871	OH-18-15321-1	Campylobacter jejuni
GCA_004819285.1	AABIBW000000000	SAMN09917867	OH-18-15124	Campylobacter jejuni
GCA_004819725.1	AABIBV000000000	SAMN09784513	AG18-0002	Campylobacter jejuni
GCA_004819825.1	AABIBU000000000	SAMN09784510	AG18-0003	Campylobacter jejuni
GCA_004819965.1	AABIBX000000000	SAMN09917873	OH-18-15321-3	Campylobacter jejuni
GCA_004820785.1	AABIBY000000000	SAMN10236229	OH-18-19951-2	Campylobacter jejuni
GCA_004821845.1	AABIEM000000000	SAMN10086690	OH-18-18281-4A	Campylobacter jejuni
GCA_005070465.1	AABYFI000000000	SAMN08040359	OH-17-25327-1	Campylobacter jejuni
GCA_005012275.1	AABUVN000000000	SAMN06068091	B16-25748	Campylobacter jejuni
GCA_004980325.1	AABSLT000000000	SAMN07823464	OH-17-20373-3	Campylobacter jejuni
GCA_004980225.1	AABSLM000000000	SAMN07823471	OH-17-20148-3	Campylobacter jejuni
GCA_005214915.1	AACILJ000000000	SAMN07709890	B1720373-3	Campylobacter jejuni
GCA_005181485.1	AACFZD000000000	SAMN07710399	B1720148-3	Campylobacter jejuni
GCA_005163145.1	AACETV000000000	SAMN08025804	OH-17-24433-1	Campylobacter jejuni
GCA_005280055.1	AACMPB000000000	SAMN11604753	AG19-0213	Campylobacter jejuni
GCA_010359165.1	AANOPX000000000	SAMN14009914	AG20-0004	Campylobacter upsaliensis
GCA_010358225.1	AANOOH000000000	SAMN14008856	AG20-0002	Campylobacter upsaliensis
GCA_005372045.1	AACTFV000000000	SAMN09850702	OH-18-17333	Campylobacter upsaliensis
GCA_005152925.1	AACEAK000000000	SAMN08040358	OH-17-25327-2	Campylobacter upsaliensis

SRA Data Details

Parameter	Value
Data volume, Gbases	46
Data volume, Mbytes	22980

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Campylobacter

GenomeTrakr Project: Ohio Department of Agriculture Animal Disease Diagnostic Laboratory

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