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Accession: PRJNA392119 ID: 392119

hot springs metagenome

hot springs metagenome Genome sequencing and assembly

The goal of this project was to characterize the microbial community of Japanese hot springs as unique analogs of early Earth environments, including those in which geobiologically important rock types like stromatolites and banded iron formations were deposited. More...
AccessionPRJNA392119
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismhot springs metagenome[Taxonomy ID: 433727]
unclassified sequences; metagenomes; ecological metagenomes; hot springs metagenome
SubmissionRegistration date: 16-Aug-2017
California Institute of Technology
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)107293
WGS master181
SRA Experiments14
Protein Sequences482713
Other datasets
BioSample200
Assembly181
Assembly details:
Assembly levelNumber of Assemblies
181
181
AssemblyLevelWGSBioSampleIsolateTaxonomy
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_003697135.1ContigRFGC00000000SAMN10119914
J014
GCA_003697015.1ContigRFGL00000000SAMN10119923
J023
GCA_003696865.1ContigRFHM00000000SAMN10119950
J050
GCA_003696155.1ContigRFFP00000000SAMN10119901
J001
GCA_003696075.1ContigRFHH00000000SAMN10119945
J045
GCA_003695645.1ContigRFHY00000000SAMN10119962
J062
GCA_003695625.1ContigRFIB00000000SAMN10119965
J065
GCA_003697065.1ContigRFFY00000000SAMN10119910
J010
GCA_003696705.1ContigRFGD00000000SAMN10119915
J015
GCA_003696035.1ContigRFID00000000SAMN10119967
J067
GCA_003695555.1ContigRFIU00000000SAMN10119984
J084
GCA_003694925.1ContigRFJK00000000SAMN10120000
J100
GCA_003695135.1ContigRFIR00000000SAMN10119981
J081
GCA_003695065.1ContigRFJA00000000SAMN10119990
J090
GCA_003694835.1ContigRFJT00000000SAMN10120009
J109
GCA_003697125.1ContigRFGB00000000SAMN10119913
J013
GCA_003694465.1ContigRFKM00000000SAMN10120028
J128
GCA_003694205.1ContigRFKS00000000SAMN10120034
J134
GCA_003694165.1ContigRFKW00000000SAMN10120038
J138
GCA_003693905.1ContigRFLL00000000SAMN10120053
J153
GCA_003693805.1ContigRFLR00000000SAMN10120059
J159
GCA_003130835.1ContigQEXX00000000SAMN08972832
Nak19
GCA_003130845.1ContigQEXW00000000SAMN08972833
Nak57
GCA_003694235.1ContigRFKO00000000SAMN10120030
J130
GCA_003694975.1ContigRFJH00000000SAMN10119997
J097
GCA_003695165.1ContigRFIS00000000SAMN10119982
J082
GCA_003694665.1ContigRFKP00000000SAMN10120031
J131
GCA_003697005.1ContigRFGO00000000SAMN10119926
J026
GCA_003693765.1ContigRFLT00000000SAMN10120061
J161
GCA_003693865.1ContigRFLQ00000000SAMN10120058
J158
GCA_003130875.1ContigQEXY00000000SAMN08972831
Nak82
GCA_003694685.1ContigRFKN00000000SAMN10120029
J129
GCA_002254585.1ContigNKPU00000000SAMN07230128
CP1_7O
GCA_002254605.1ContigNKPV00000000SAMN07230129
JP3_11
GCA_003695835.1ContigRFHN00000000SAMN10119951
J051
GCA_003695875.1ContigRFGM00000000SAMN10119924
J024
GCA_003694045.1ContigRFLD00000000SAMN10120045
J145
GCA_003694295.1ContigRFKK00000000SAMN10120026
J126
GCA_003694615.1ContigRFLB00000000SAMN10120043
J143
GCA_003695465.1ContigRFJC00000000SAMN10119992
J092
GCA_003695425.1ContigRFJJ00000000SAMN10119999
J099
GCA_003695245.1ContigRFIN00000000SAMN10119977
J077
GCA_003695295.1ContigRFIJ00000000SAMN10119973
J073
GCA_003696875.1ContigRFHL00000000SAMN10119949
J049
GCA_003696835.1ContigRFHT00000000SAMN10119957
J057
GCA_003696585.1ContigRFGW00000000SAMN10119934
J034
GCA_003696485.1ContigRFHD00000000SAMN10119941
J041
GCA_003696175.1ContigRFGA00000000SAMN10119912
J012
GCA_003694355.1ContigRFKI00000000SAMN10120024
J124
GCA_003695385.1ContigRFKH00000000SAMN10120023
J123
GCA_003694735.1ContigRFKB00000000SAMN10120017
J117
GCA_003694905.1ContigRFJM00000000SAMN10120002
J102
GCA_003697425.1ContigRFJY00000000SAMN10120014
J114
GCA_003695345.1ContigRFIG00000000SAMN10119970
J070
GCA_003695285.1ContigRFIL00000000SAMN10119975
J075
GCA_003695965.1ContigRFFW00000000SAMN10119908
J008
GCA_003696445.1ContigRFHE00000000SAMN10119942
J042
GCA_003696775.1ContigRFFS00000000SAMN10119904
J004
GCA_003694105.1ContigRFKZ00000000SAMN10120041
J141
GCA_003694115.1ContigRFKY00000000SAMN10120040
J140
GCA_003696425.1ContigRFHI00000000SAMN10119946
J046
GCA_003696525.1ContigRFGX00000000SAMN10119935
J035
GCA_003695505.1ContigRFIY00000000SAMN10119988
J088
GCA_003695355.1ContigRFJR00000000SAMN10120007
J107
GCA_003694225.1ContigRFKT00000000SAMN10120035
J135
GCA_003694065.1ContigRFLA00000000SAMN10120042
J142
GCA_003694175.1ContigRFKV00000000SAMN10120037
J137
GCA_003695005.1ContigRFJE00000000SAMN10119994
J094
GCA_003696745.1ContigRFGG00000000SAMN10119918
J018
GCA_003697085.1ContigRFFU00000000SAMN10119906
J006
GCA_003695105.1ContigRFIZ00000000SAMN10119989
J089
GCA_003695185.1ContigRFIP00000000SAMN10119979
J079
GCA_003694055.1ContigRFLC00000000SAMN10120044
J144
GCA_003693875.1ContigRFLO00000000SAMN10120056
J156
GCA_003693815.1ContigRFLS00000000SAMN10120060
J160
GCA_003694545.1ContigRFKD00000000SAMN10120019
J119
GCA_003694575.1ContigRFLG00000000SAMN10120048
J148
GCA_003694565.1ContigRFLM00000000SAMN10120054
J154
GCA_003695395.1ContigRFJQ00000000SAMN10120006
J106
GCA_016841965.1ContigJAEANN000000000SAMN16955785
AA3_104
GCA_003695725.1ContigRFHX00000000SAMN10119961
J061
GCA_002794615.1ContigPGTL00000000SAMN07982848
CP1_1M
GCA_002794705.1ContigPGTK00000000SAMN07982849
CP2_2F
GCA_002794555.1ContigPGTM00000000SAMN07982847
JP3_13
GCA_002794645.1ContigPGTN00000000SAMN07982846
JP3_7
GCA_003693775.1ContigRFLU00000000SAMN10120062
J162
GCA_003694525.1ContigRFLK00000000SAMN10120052
J152
GCA_003694495.1ContigRFJO00000000SAMN10120004
J104
GCA_003694385.1ContigRFKA00000000SAMN10120016
J116
GCA_003695435.1ContigRFJL00000000SAMN10120001
J101
GCA_003694805.1ContigRFJU00000000SAMN10120010
J110
GCA_003695265.1ContigRFII00000000SAMN10119972
J072
GCA_003695045.1ContigRFJB00000000SAMN10119991
J091
GCA_003694285.1ContigRFKL00000000SAMN10120027
J127
GCA_002254845.1ContigNKPT00000000SAMN07230127
CP2_5A
GCA_003695605.1ContigRFIK00000000SAMN10119974
J074
GCA_003695675.1ContigRFIA00000000SAMN10119964
J064
GCA_003695455.1ContigRFJF00000000SAMN10119995
J095
GCA_003695545.1ContigRFIW00000000SAMN10119986
J086
GCA_003694395.1ContigRFKC00000000SAMN10120018
J118
GCA_003694775.1ContigRFJV00000000SAMN10120011
J111
GCA_003695215.1ContigRFIM00000000SAMN10119976
J076
GCA_003696605.1ContigRFGV00000000SAMN10119933
J033
GCA_003696945.1ContigRFGY00000000SAMN10119936
J036
GCA_003696565.1ContigRFHA00000000SAMN10119938
J038
GCA_003696545.1ContigRFHB00000000SAMN10119939
J039
GCA_003696405.1ContigRFHF00000000SAMN10119943
J043
GCA_003697365.1ContigRFGP00000000SAMN10119927
J027
GCA_003693955.1ContigRFLI00000000SAMN10120050
J150
GCA_003696925.1ContigRFFR00000000SAMN10119903
J003
GCA_003695985.1ContigRFFV00000000SAMN10119907
J007
GCA_003695795.1ContigRFHR00000000SAMN10119955
J055
GCA_003695655.1ContigRFIF00000000SAMN10119969
J069
GCA_003695125.1ContigRFIT00000000SAMN10119983
J083
GCA_003693975.1ContigRFLH00000000SAMN10120049
J149
GCA_003695925.1ContigRFFZ00000000SAMN10119911
J011
GCA_003696105.1ContigRFGE00000000SAMN10119916
J016
GCA_003696955.1ContigRFGU00000000SAMN10119932
J032
GCA_003696505.1ContigRFHC00000000SAMN10119940
J040
GCA_003695515.1ContigRFIX00000000SAMN10119987
J087
GCA_003695785.1ContigRFHS00000000SAMN10119956
J056
GCA_003695205.1ContigRFIO00000000SAMN10119978
J078
GCA_003694725.1ContigRFKG00000000SAMN10120022
J122
GCA_003694255.1ContigRFKR00000000SAMN10120033
J133
GCA_003694325.1ContigRFKJ00000000SAMN10120025
J125
GCA_003694345.1ContigRFKF00000000SAMN10120021
J121
GCA_003694145.1ContigRFKX00000000SAMN10120039
J139
GCA_003695085.1ContigRFIV00000000SAMN10119985
J085
GCA_003694605.1ContigRFKU00000000SAMN10120036
J136
GCA_003695765.1ContigRFHQ00000000SAMN10119954
J054
GCA_003695825.1ContigRFHK00000000SAMN10119948
J048
GCA_003696665.1ContigRFGJ00000000SAMN10119921
J021
GCA_003696645.1ContigRFGN00000000SAMN10119925
J025
GCA_003696465.1ContigRFHG00000000SAMN10119944
J044
GCA_003696905.1ContigRFHJ00000000SAMN10119947
J047
GCA_003694425.1ContigRFJX00000000SAMN10120013
J113
GCA_003694005.1ContigRFLE00000000SAMN10120046
J146
GCA_003695865.1ContigRFGQ00000000SAMN10119928
J028
GCA_003697105.1ContigRFFQ00000000SAMN10119902
J002
GCA_013538855.1ContigJABXJS000000000SAMN14439215
OHK22
GCA_003693835.1ContigRFLP00000000SAMN10120057
J157
GCA_003694015.1ContigRFLF00000000SAMN10120047
J147
GCA_003695745.1ContigRFHW00000000SAMN10119960
J060
GCA_003694965.1ContigRFJG00000000SAMN10119996
J096
GCA_003696825.1ContigRFHV00000000SAMN10119959
J059
GCA_003696125.1ContigRFHZ00000000SAMN10119963
J063
GCA_003696065.1ContigRFHP00000000SAMN10119953
J053
GCA_003696145.1ContigRFGZ00000000SAMN10119937
J037
GCA_003695915.1ContigRFGF00000000SAMN10119917
J017
GCA_003696005.1ContigRFIC00000000SAMN10119966
J066
GCA_003696975.1ContigRFGT00000000SAMN10119931
J031
GCA_003694865.1ContigRFJP00000000SAMN10120005
J105
GCA_003693935.1ContigRFLN00000000SAMN10120055
J155
GCA_002794695.1ContigPGTI00000000SAMN07982851
CP2_42A
GCA_002794585.1ContigPGTG00000000SAMN07982853
JP1_16
GCA_002794545.1ContigPGTE00000000SAMN07982855
JP1_191
GCA_002794515.1ContigPGTJ00000000SAMN07982850
CP2_20G
GCA_002794505.1ContigPGTF00000000SAMN07982854
JP1_20
GCA_002794595.1ContigPGTH00000000SAMN07982852
JP1_8
GCA_003696025.1ContigRFIE00000000SAMN10119968
J068
GCA_003697045.1ContigRFGK00000000SAMN10119922
J022
GCA_003696725.1ContigRFGI00000000SAMN10119920
J020
GCA_003696385.1ContigRFHO00000000SAMN10119952
J052
GCA_003696625.1ContigRFGR00000000SAMN10119929
J029
GCA_003696675.1ContigRFGH00000000SAMN10119919
J019
GCA_003694765.1ContigRFJW00000000SAMN10120012
J112
GCA_003694875.1ContigRFJN00000000SAMN10120003
J103
GCA_003694635.1ContigRFKQ00000000SAMN10120032
J132
GCA_003695565.1ContigRFIQ00000000SAMN10119980
J080
GCA_003695705.1ContigRFHU00000000SAMN10119958
J058
GCA_003695305.1ContigRFIH00000000SAMN10119971
J071
GCA_003693915.1ContigRFLJ00000000SAMN10120051
J151
GCA_003694415.1ContigRFJZ00000000SAMN10120015
J115
GCA_003694475.1ContigRFKE00000000SAMN10120020
J120
GCA_014466085.1ContigJACOMP000000000SAMN15831770
OHK43
GCA_003694825.1ContigRFJS00000000SAMN10120008
J108
GCA_003695015.1ContigRFJD00000000SAMN10119993
J093
GCA_003694935.1ContigRFJI00000000SAMN10119998
J098
GCA_003696765.1ContigRFFX00000000SAMN10119909
J009
GCA_003696795.1ContigRFFT00000000SAMN10119905
J005
GCA_003695905.1ContigRFGS00000000SAMN10119930
J030
SRA Data Details
ParameterValue
Data volume, Gbases79
Data volume, Mbytes28914

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