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Accession: PRJNA556735 ID: 556735

Spheniscidae (penguins)

Spheniscidae Genome sequencing and assembly

We have sequenced and assemblied 19 penguin genomes.

Accession	PRJNA556735
Data Type	Genome sequencing and assembly
Scope	Multispecies
Organism	Spheniscidae[Taxonomy ID: 9231] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Aequornithes; Sphenisciformes; Spheniscidae
Publications	Pan H et al., "High-coverage genomes to elucidate the evolution of penguins.", Gigascience, 2019 Sep 1;8(9)
Submission	Registration date: 31-Jan-2020 BGI-Shenzhen
Relevance	Evolution

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	44573
WGS master	19
SRA Experiments	116
Protein Sequences	281403
Publications
PubMed	1
PMC	1
Other datasets
BioSample	19
Assembly	19

Assembly details:

Assembly level

Number of Assemblies

Scaffold

19
19

Assembly	Level	WGS	BioSample	Isolate	Taxonomy
GCA_010087175.1		VULM00000000	SAMN12384866	KP FORT 001	Aptenodytes patagonicus
GCA_010085355.1		VULL00000000	SAMN12384872	RH 110-1	Eudyptes chrysocome
GCA_010084205.1		VULJ00000000	SAMN12384869	MP PEI 1	Eudyptes chrysolophus
GCA_010085365.1		VULK00000000	SAMN12384873	GS 12	Eudyptes filholi
GCA_010082375.1		VULI00000000	SAMN12384871	NRP 118-1	Eudyptes moseleyi
GCA_010085335.1		VULH00000000	SAMN12384875	MS 9	Eudyptes pachyrhynchus
GCA_010085315.1		VULG00000000	SAMN12384876	68M 28/09/13	Eudyptes robustus
GCA_010080425.1		VULF00000000	SAMN12384870	4458	Eudyptes schlegeli
GCA_010078445.1		VULE00000000	SAMN12384874	Ant 5	Eudyptes sclateri
GCA_010080465.1		VULD00000000	SAMN12384880	Fred	Eudyptula albosignata
GCA_010080355.1		VULC00000000	SAMN12384879	Gonzo	Eudyptula minor
GCA_010078495.1		VULB00000000	SAMN12384878	10/9/18-1	Eudyptula minor novaehollandiae
GCA_010078485.1		VULA00000000	SAMN12384877	OT 2 9/2/18	Megadyptes antipodes antipodes
GCA_010078415.1		VUKZ00000000	SAMN12384868	CP TH 060	Pygoscelis antarcticus
GCA_010090195.1		VUKY00000000	SAMN12384867	DNA -4	Pygoscelis papua
GCA_010077935.1		VUKX00000000	SAMN12384881	AP 173	Spheniscus demersus
GCA_010076325.1		VUKW00000000	SAMN12384883	Z-67-15	Spheniscus humboldti
GCA_010076225.1		VUKV00000000	SAMN12384882	AH 6	Spheniscus magellanicus
GCA_010077915.1		VUKU00000000	SAMN12384884	GAPE 212	Spheniscus mendiculus

SRA Data Details

Parameter	Value
Data volume, Gbases	3,581
Data volume, Tbytes	2.04

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