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Select item 10690401.

Mitochondrial microRNA profiles are altered in thirteen-lined ground squirrels (Ictidomys tridecemlineatus) during hibernation

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Paul Craig Lab, Biology, University of Waterloo

Accession:: PRJNA1069040
ID:: 1069040

Select item 10464722.

StrokeofGenus: RNA-seq in five tissues of the hibernating 13-lined ground squirrel

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Johns Hopkins School of Medicine

Accession:: PRJNA1046472
ID:: 1046472

Select item 10156813.

Kidney MicroRNAome of ground squirrel in response to torpor

: Project data type: Raw sequence reads

Scope:: Multispecies

Carleton University

Accession:: PRJNA1015681
ID:: 1015681

Select item 10133354.

Hypothalamic thyroid hormone deficiency underlies reversible anorexia in a mammalian hibernator

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Elena Gracheva Lab, Cellular & Molecular Physiology, Yale University School of Medicine

Accession:: PRJNA1013335
ID:: 1013335

Select item 10103985.

MicroRNA sequencing of euthermic vs. 24 hour hibernating cardiac tissue in Ictidomys tridecemlineatus

: Project data type: Raw sequence reads

Scope:: Multispecies

Carleton University

Accession:: PRJNA1010398
ID:: 1010398

Select item 9941766.

Evolution of neuronal cell classes and types in the vertebrate retina [Squirrel]

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Karthik Shekhar, Chemical and Biomolecular Engineering, UC Berkeley

Accession:: PRJNA994176
ID:: 994176

Select item 9649417.

Neural control of fluid homeostasis is engaged below 10°C in hibernation

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cellular & Molecular Physiology; Neuroscience, Yale University

Accession:: PRJNA964941
ID:: 964941

Select item 9432308.

Kidney gene expression dynamics during torpor-arousal cycles in hibernating 13-lined ground squirrels

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Colorado Anschutz Medical Campus

Accession:: PRJNA943230
ID:: 943230

Select item 9270349.

Genome Skimming with Nanopore Sequencing Precisely Determines Global and Transposon DNA Methylation in Vertebrates

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Minnesota

Accession:: PRJNA927034
ID:: 927034

Select item 85415910.

Activation of immediate early response genes initiates a restorative gene expression program during each arousal from torpor in hibernating 13-lined ground squirrels

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Colorado Anschutz Medical Campus

Accession:: PRJNA854159
ID:: 854159

Select item 71411311.

Ictidomys tridecemlineatus

Ictidomys tridecemlineatus RefSeq Genome sequencing and assembly

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: RefSeq Genome sequencing and assembly

Scope:: Monoisolate

NCBI

Accession:: PRJNA714113
ID:: 714113

Select item 70206212.

Liver transcriptome dynamics during hibernation are shaped by a shifting balance between transcription and RNA stability

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cell and Developmental Biology, University of Colorado School of Medicine

Accession:: PRJNA702062
ID:: 702062

Select item 70063213.

GRO-seq analysis of liver gene transcription in hibernating 13-lined ground squirrels

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cell and Developmental Biology, University of Colorado School of Medicine

Accession:: PRJNA700632
ID:: 700632

Select item 66291314.

Small RNA sequencing of hibernator brown fat

: Project data type: Raw sequence reads

Scope:: Multispecies

Carleton University

Accession:: PRJNA662913
ID:: 662913

Select item 64891415.

Evolutionary transcriptomics implicates HAND2 in the origins of implantation and regulation of gestation length

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Shubin, Basu, Organismal Biology; Genetic Medicine, University of Chicago

Accession:: PRJNA648914
ID:: 648914

Select item 64738916.

Ictidomys tridecemlineatus

Ictidomys tridecemlineatus Hi-C Genome sequencing, assembly and annotation

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Stanford University School of Medicine

Accession:: PRJNA647389
ID:: 647389

Select item 62527917.

Transcriptomic changes of optic nerves under crush during hibernation stage

Organism:: Ictidomys tridecemlineatus

Taxonomy:: Ictidomys tridecemlineatus (thirteen-lined ground squirrel)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Zhongshan Ophthalmic Center, Sun Yat-sen university

Accession:: PRJNA625279
ID:: 625279

Select item 52804218.

Ictidomys tridecemlineatus

piRNA analysis of the 13-lined ground squirrel

: Project data type: Raw sequence reads

Scope:: Multispecies

Eastern New Mexico University

Accession:: PRJNA528042
ID:: 528042

Select item 45389119.

Curated eutherian third party data gene data sets

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

The Australian National University Alumni

Accession:: PRJNA453891
ID:: 453891

Select item 42060920.

13-lined ground squirrel onset of hibernation genetic mapping

: Project data type: Raw sequence reads

Scope:: Multispecies

Stanford University School of Medicine

Accession:: PRJNA420609
ID:: 420609

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