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Items: 1 to 20 of 32

1.

Kidney MicroRNAome of ground squirrel in response to torpor

Project data type: Raw sequence reads
Scope:
Multispecies
Carleton University
Accession:
PRJNA1015681
ID:
1015681

2.

Hypothalamic thyroid hormone deficiency underlies reversible anorexia in a mammalian hibernator

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Elena Gracheva Lab, Cellular & Molecular Physiology, Yale University School of Medicine
Accession:
PRJNA1013335
ID:
1013335

3.

MicroRNA sequencing of euthermic vs. 24 hour hibernating cardiac tissue in Ictidomys tridecemlineatus

Project data type: Raw sequence reads
Scope:
Multispecies
Carleton University
Accession:
PRJNA1010398
ID:
1010398

4.

Evolution of neuronal cell classes and types in the vertebrate retina [Squirrel]

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Karthik Shekhar, Chemical and Biomolecular Engineering, UC Berkeley
Accession:
PRJNA994176
ID:
994176

5.

Neural control of fluid homeostasis is engaged below 10°C in hibernation

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Cellular & Molecular Physiology; Neuroscience, Yale University
Accession:
PRJNA964941
ID:
964941

6.

Kidney gene expression dynamics during torpor-arousal cycles in hibernating 13-lined ground squirrels

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Colorado Anschutz Medical Campus
Accession:
PRJNA943230
ID:
943230

7.

Genome Skimming with Nanopore Sequencing Precisely Determines Global and Transposon DNA Methylation in Vertebrates

Project data type: Raw sequence reads
Scope:
Multispecies
University of Minnesota
Accession:
PRJNA927034
ID:
927034

8.

Activation of immediate early response genes initiates a restorative gene expression program during each arousal from torpor in hibernating 13-lined ground squirrels

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Colorado Anschutz Medical Campus
Accession:
PRJNA854159
ID:
854159

9.

Ictidomys tridecemlineatus

Ictidomys tridecemlineatus RefSeq Genome sequencing and assembly

Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: RefSeq Genome sequencing and assembly
Scope:
Monoisolate
NCBI
Accession:
PRJNA714113
ID:
714113

10.

Liver transcriptome dynamics during hibernation are shaped by a shifting balance between transcription and RNA stability

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Cell and Developmental Biology, University of Colorado School of Medicine
Accession:
PRJNA702062
ID:
702062

11.

GRO-seq analysis of liver gene transcription in hibernating 13-lined ground squirrels

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Cell and Developmental Biology, University of Colorado School of Medicine
Accession:
PRJNA700632
ID:
700632

12.

Small RNA sequencing of hibernator brown fat

Project data type: Raw sequence reads
Scope:
Multispecies
Carleton University
Accession:
PRJNA662913
ID:
662913

13.

Evolutionary transcriptomics implicates HAND2 in the origins of implantation and regulation of gestation length

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
Shubin, Basu, Organismal Biology; Genetic Medicine, University of Chicago
Accession:
PRJNA648914
ID:
648914

14.

Ictidomys tridecemlineatus

Ictidomys tridecemlineatus Hi-C Genome sequencing, assembly and annotation

Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Stanford University School of Medicine
Accession:
PRJNA647389
ID:
647389

15.

Transcriptomic changes of optic nerves under crush during hibernation stage

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Zhongshan Ophthalmic Center, Sun Yat-sen university
Accession:
PRJNA625279
ID:
625279

16.

Ictidomys tridecemlineatus

piRNA analysis of the 13-lined ground squirrel

Project data type: Raw sequence reads
Scope:
Multispecies
Eastern New Mexico University
Accession:
PRJNA528042
ID:
528042

17.

Curated eutherian third party data gene data sets

Project data type: Genome sequencing and assembly
Scope:
Multispecies
The Australian National University Alumni
Accession:
PRJNA453891
ID:
453891

18.

13-lined ground squirrel onset of hibernation genetic mapping

Project data type: Raw sequence reads
Scope:
Multispecies
Stanford University School of Medicine
Accession:
PRJNA420609
ID:
420609

19.

Ictidomys tridecemlineatus isolate:GS200

Ictidomys tridecemlineatus isolate:GS200 Genome sequencing and assembly

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
13-lined ground squirrel genome sequencing consortium
Accession:
PRJNA420392
ID:
420392

20.

Dynamic Temperature-Sensitive A-to-I RNA editing in the Brain of a Heterothermic Mammal during Hibernation

Organism:
Ictidomys tridecemlineatus
Taxonomy:
Ictidomys tridecemlineatus (thirteen-lined ground squirrel)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Biochemistry and Molecular Genetics, University of Colorado School of Medicine
Accession:
PRJNA418486
ID:
418486

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