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Select item 11049241.

Genomic Investigation of Selection Signatures and Diversity in Seven Ethiopian Indigenous Cattle Breeds

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB75238
ID:: 1104924

Select item 11036302.

Annotation of desi cattle reference genome

Iso seq data for the annotation of reference genome assembly of desi cattle.

: Project data type: Other

Scope:: Monoisolate

Indian Biological Data Centre

Accession:: PRJEB75154
ID:: 1103630

Select item 11035093.

Identification of key molecular factors involved in resistance or susceptibility to para-tuberculosis infection in indigenous breeds of cows.

This study provides crucial insights into the transcriptomic and genomic landscape of both infected and uninfected cattle revealing key genes, lncRNAs and SNPs associated with the disease condition. By identifying DEGs and potential biomarkers linked to MAP infection, the study offers valuable contributions to disease management and molecular understanding. These markers hold promise for integration into breeding programs facilitating the selection of cattle with increased resistance to MAP infection.

: Project data type: Other

Scope:: Monoisolate

Indian Biological Data Centre

Accession:: PRJEB72268
ID:: 1103509

Select item 10967334.

Bos indicus Genome sequencing

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Genome sequencing

Scope:: Multispecies

University of Illinois at Urbana Champaign

Accession:: PRJNA1096733
ID:: 1096733

Select item 10906345.

Bos indicus breed:Brahman

Novel genomic technologies to improve fertility in Northern Beef Cattle

Organism:: Bos indicus

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Raw sequence reads

Scope:: Multiisolate

QAAFI - University of Queensland

Accession:: PRJNA1090634
ID:: 1090634

Select item 10753566.

Ethiopian Boran cattle Whole Genome sequence

: Project data type: Raw sequence reads

Scope:: Multispecies

Addis Ababa University

Accession:: PRJNA1075356
ID:: 1075356

Select item 10595147.

Bos indicus Raw sequence reads

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences

Accession:: PRJNA1059514
ID:: 1059514

Select item 10570598.

Whole genome sequencing of Hainan cattle

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Other

Scope:: Multiisolate

Beijing Institute of Genomics Chinese Acad of Sci - Key Lab

Accession:: PRJNA1057059
ID:: 1057059

Select item 10534889.

Bos indicus Raw sequence reads

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences

Accession:: PRJNA1053488
ID:: 1053488

Select item 103313210.

Novel putative causal mutations associated with fat traits in Nellore cattle uncovered by eQTLs located in open chromatin regions

: Project data type: Other

Scope:: Monoisolate

escola superior de agricultura "luiz de queiroz

Accession:: PRJEB64479
ID:: 1033132

Select item 102645211.

Bos indicus breed:Zwergzebu

Investigate the susceptibility of different livestock breeds to infectious diseases using blood-based in vitro and ex vivo assays - Zebu

Organism:: Bos indicus

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB67281
ID:: 1026452

Select item 102633512.

Whole genome sequencing of Ladakhi cattle

: Project data type: Raw sequence reads

Scope:: Multispecies

ICAR-National Bureau of Animal Genetic Resources

Accession:: PRJNA1026335
ID:: 1026335

Select item 102592313.

Whole genome sequencing of Sahiwal and Kangayam cattlle

: Project data type: Raw sequence reads

Scope:: Multispecies

ICAR-National Bureau of Animal Genetic Resources

Accession:: PRJNA1025923
ID:: 1025923

Select item 100593314.

Whole-genome sequencing of Zebu cattle

: Project data type: Raw sequence reads

Scope:: Multispecies

Agroscope

Accession:: PRJNA1005933
ID:: 1005933

Select item 99537115.

The hic data of yak and cattle Raw sequence reads

: Project data type: Raw sequence reads

Scope:: Multispecies

Lanzhou University

Accession:: PRJNA995371
ID:: 995371

Select item 97694916.

Transcriptome analysis of sex sorted and unsorted spermatozoa of indicus cattle (Bos indicus)

: Project data type: Raw sequence reads

Scope:: Multispecies

ICAR-Indian Institute of Agricultural Biotechnology

Accession:: PRJNA976949
ID:: 976949

Select item 97571117.

Kashmiri cattle(Bos indicus) Raw sequence reads

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Raw sequence reads

Scope:: Monoisolate

Northwest A&F University

Accession:: PRJNA975711
ID:: 975711

Select item 97195918.

Bos indicus breed:Red Chittagong Cow

Red Chittagong Cattle Breeding and Revealing Their Genomic Architecture Through Whole Genome Resequencing

Organism:: Bos indicus

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Bangladesh Agricultural University (BAU); Bangladesh Livestock Research Institute (BLRI)

Accession:: PRJNA971959
ID:: 971959

Select item 96078019.

Bos indicus breed:Badri

Comparative genome sequencing for identification of valuable genes in Indigenous Badri cow (Hill cattle) of Uttarakhand

Organism:: Bos indicus

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB59419
ID:: 960780

Select item 95758220.

Bos indicus isolate:VRC1

Bos indicus isolate:VRC1 Genome sequencing and assembly

Organism:: Bos indicus

Taxonomy:: Bos indicus (zebu cattle)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Indian Institute of Science Education and Research

Accession:: PRJNA957582
ID:: 957582

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