Candidatus Kentron sp. LFY genome

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Organism: Candidatus Kentron sp. LFY
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Gammaproteobacteria incertae sedis; Candidatus Kentron; unclassified Candidatus Kentron

Attributes

collection date	2014-06-08
broad-scale environmental context	marine neritic benthic zone biome
local-scale environmental context	sea grass bed
environmental medium	shallow marine sediment
geographic location	Italy
investigation type	metagenome-assembled genome
isolation source	Kentrophoros sp. LFY
project name	Metagenomics of Kentrophoros ciliate-bacteria symbiosis
sample name	BECK_M7
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2019-02-10T17:31:59Z
ENA-LAST-UPDATE	2019-02-07T10:27:29Z
External Id	SAMEA5328731
INSDC center name	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public	2019-02-10T17:31:59Z
INSDC last update	2019-02-07T10:27:29Z
INSDC status	public
Submitter Id	BECK_M7
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	SPAdes 3.5.0
binning parameters	kmer+coverage
binning software	combination
completeness score	94
completeness software	checkm
contamination score	0.75
geographic location (latitude)	42.734192
geographic location (longitude)	10.185868
metagenomic source	1969832
sample derived from	ERS2281223
scientific_name	Candidatus Kentron sp. LFY
sequencing method	Illumina
taxonomic identity marker	16S gene

Description: This sample represents a MAG from the metagenomic sample ERS2281223

BioProject: PRJEB25374 Kentrophoros metagenomics
Retrieve all samples from this project

Candidatus Kentron sp. LFY genome
Candidatus Kentron sp. LFY genome

biosample
Homo sapiens full open reading frame cDNA clone RZPDo834F0223D for gene SNN, sta...
Homo sapiens full open reading frame cDNA clone RZPDo834F0223D for gene SNN, stannin; complete cds, without stopcodon
gi|49457271|emb|CR542138.1|

Nucleotide
Homo sapiens stannin mRNA, complete cds
Homo sapiens stannin mRNA, complete cds
gi|1433531128|gb|AF070673.2|

Nucleotide
Homo sapiens full open reading frame cDNA clone RZPDo834A1023D for gene SNN, sta...
Homo sapiens full open reading frame cDNA clone RZPDo834A1023D for gene SNN, stannin; complete cds, incl. stopcodon
gi|49457249|emb|CR542127.1|

Nucleotide

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