Candidatus Kentron sp. UNK genome

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Organism: Candidatus Kentron sp. UNK
cellular organisms; Bacteria; Pseudomonadota; Gammaproteobacteria; Gammaproteobacteria incertae sedis; Candidatus Kentron; unclassified Candidatus Kentron

Attributes

collection date	2014-11-06
broad-scale environmental context	marine neritic benthic zone biome
local-scale environmental context	sea grass bed
environmental medium	shallow marine sediment
geographic location	Italy
investigation type	metagenome-assembled genome
isolation source	Kentrophoros sp. UNK
project name	Metagenomics of Kentrophoros ciliate-bacteria symbiosis
sample name	BECK_BY8
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2019-02-10T17:31:59Z
ENA-LAST-UPDATE	2019-02-07T10:27:29Z
External Id	SAMEA5328736
INSDC center name	MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY
INSDC first public	2019-02-10T17:31:59Z
INSDC last update	2019-02-07T10:27:29Z
INSDC status	public
Submitter Id	BECK_BY8
assembly quality	Multiple fragments where gaps span repetitive regions. Presence of the 23S, 16S, and 5S rRNA genes and at least 18 tRNAs
assembly software	SPAdes 3.5.0
binning parameters	kmer+coverage
binning software	combination
completeness score	94
completeness software	checkm
contamination score	3.28
geographic location (latitude)	42.734192
geographic location (longitude)	10.185868
metagenomic source	1969832
sample derived from	ERS2281228
scientific_name	Candidatus Kentron sp. UNK
sequencing method	Illumina
taxonomic identity marker	16S gene

Description: This sample represents a MAG from the metagenomic sample ERS2281228

BioProject: PRJEB25374 Kentrophoros metagenomics
Retrieve all samples from this project

Candidatus Kentron sp. UNK genome
Candidatus Kentron sp. UNK genome

biosample
Candidatus Kentron sp. G genome
Candidatus Kentron sp. G genome

biosample
CR984360 RZPD no.9016 Homo sapiens cDNA clone RZPDp9016M1034 5', mRNA sequence
CR984360 RZPD no.9016 Homo sapiens cDNA clone RZPDp9016M1034 5', mRNA sequence
gi|68222694|gnl|dbEST|29743379|emb| 360.1|

Nucleotide
collagen alpha-1(XXII) chain isoform X5 [Homo sapiens]
collagen alpha-1(XXII) chain isoform X5 [Homo sapiens]
gi|2462618031|ref|XP_054215852.1|

Protein
unnamed protein product [Mus musculus]
unnamed protein product [Mus musculus]
gi|74191777|dbj|BAE32844.1|

Protein

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