MIGS Cultured Bacterial/Archaeal sample from Strep... - BioSample

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Identifiers: BioSample: SAMN00116778; Sample name: HMPREF9320; SRA: SRS118311

Organism: Streptococcus pseudoporcinus SPIN 20026
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus pseudoporcinus

Attributes

collection date	not determined
estimated size	2111000
isolation and growth condition	not determined
host	Homo sapiens
latitude and longitude	not determined
broad-scale environmental context	terrestrial biome [ENVO:00000446]
investigation type	missing
local-scale environmental context	human-associated habitat [ENVO:00009003]
host taxonomy ID	9606 (9606)
project name	Streptococcus pseudoporcinus SPIN 20026
geographic location	not determined
source material identifiers	not determined
environmental medium	biological product [ENVO:02000043]
reference for biomaterial	not determined
number of replicons	not determined
strain	SPIN 20026
environmental package	missing
isolation source	missing
finishing strategy (depth of coverage)	Level 2: High-Quality Draft38.8x;35
project_type	Reference Genome
misc_param: HMP body site	Vaginal
nucleic acid extraction	not determined
assembly	Newbler v. 2.3
misc_param: HMP supersite	urogenital_tract
sequencing method	454-GS-FLX-Titanium
sop	http://hmpdacc.org/doc/CommonGeneAnnotation_SOP.pdf