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Human gut genome

Identifiers
BioSample: SAMEA5852311; SRA: ERS3640836
Organism
uncultured Leuconostoc sp.
cellular organisms; Bacteria; Bacillati; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae; Leuconostoc; environmental samples
Attributes
broad-scale environmental contexthuman-associated habitat
local-scale environmental contexthuman gut
geographic locationPeru
investigation typemetagenome
isolation sourcehuman gut
project nameHuman gut genomes
sample nameMGYG-HGUT-02806
ENA-CHECKLISTERC000011
ENA-FIRST-PUBLIC2019-08-06T09:56:46Z
ENA-LAST-UPDATE2019-08-09T12:56:16Z
External IdSAMEA5852311
INSDC center nameEMG
INSDC first public2019-08-06T09:56:46Z
INSDC last update2019-08-09T12:56:16Z
INSDC statuspublic
Submitter IdMGYG-HGUT-02806
assembly qualityMany fragments with little to no review of assembly other than reporting of standard assembly statistics
broker nameEBI-EMG
common nameuncultured Leuconostoc sp.
completeness score79.03
contamination score2.85
metagenomic sourcehuman gut metagenome
sample derived fromSRS820613
scientific_nameuncultured Leuconostoc sp.
BioProject
PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Submission
EBI; 2019-08-07
Accession:
SAMEA5852311
ID:
12521308

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