Human gut genome

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Result Filters

Organism: uncultured Bifidobacterium sp.
cellular organisms; Bacteria; Bacillati; Actinomycetota; Actinomycetes; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples

Attributes

broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
geographic location	USA
investigation type	metagenome
isolation source	human gut
project name	Human gut genomes
sample name	MGYG-HGUT-03383
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2019-08-06T09:56:55Z
ENA-LAST-UPDATE	2019-08-09T12:56:22Z
External Id	SAMEA5852889
INSDC center name	EMG
INSDC first public	2019-08-06T09:56:55Z
INSDC last update	2019-08-09T12:56:22Z
INSDC status	public
Submitter Id	MGYG-HGUT-03383
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
broker name	EBI-EMG
common name	uncultured Bifidobacterium sp.
completeness score	100
contamination score	2.38
metagenomic source	human gut metagenome
sample derived from	SRS371839
scientific_name	uncultured Bifidobacterium sp.

BioProject: PRJEB33885 The Unified Human Gastrointestinal Genome catalogue
Retrieve all samples from this project

Human gut genome
Human gut genome

biosample
Homo sapiens aldo-keto reductase family 7 member A2 (AKR7A2), transcript variant...
Homo sapiens aldo-keto reductase family 7 member A2 (AKR7A2), transcript variant 1, mRNA
gi|1878067976|ref|NM_003689.4|

Nucleotide
DB032996 TESTI2 Homo sapiens cDNA clone TESTI2017631 5', mRNA sequence
DB032996 TESTI2 Homo sapiens cDNA clone TESTI2017631 5', mRNA sequence
gi|83038088|gnl|dbEST|34153478|dbj| 996.1|

Nucleotide
PREDICTED: Homo sapiens antizyme inhibitor 2 (AZIN2), transcript variant X8, mRN...
PREDICTED: Homo sapiens antizyme inhibitor 2 (AZIN2), transcript variant X8, mRNA
gi|2217263520|ref|XM_047443474.1|

Nucleotide

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