U_72458 - BioSample - NCBI

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U_72458

Identifiers: BioSample: SAMN13192961; Sample name: UBA10516 genome recovered from SRX559915; SRA: SRS5771349

Organism: Methanoregulaceae archaeon
cellular organisms; Archaea; Euryarchaeota; Stenosarchaea group; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; unclassified Methanoregulaceae

Package: MIMAG: metagenome-assembled genome; version 6.0

Attributes

isolate	UBA10516
collection date	not available
broad-scale environmental context	tailings pond
local-scale environmental context	Pond
environmental medium	waste water
geographic location	Canada: North Alberta
isolation source	hydrocarbon
latitude and longitude	57.02 N 111.55 W
derived from	This BioSample is a metagenomic assembly obtained from the publicly available reads deposited in SRA accessions: SRR1313281,SRR1313282,SRR1313285,SRR1313283,SRR1313287,SRR1313284
metagenome source	hydrocarbon metagenome
assembly_method	CLC de novo assembler
assembly_method_version	4.4.1
completeness_estimated	0.8676
contamination_estimated	0.0131
environmental_sample	True
mapping_method_version	BWA (BWA-MEM)
mapping_method	0.7.12-r1039
metagenomic	True
quality_assessment_method	CheckM
quality_assessment_method_version	1.0.6

Description

Uncultivated genome recovered from an assembly of the SRX559915 metagenome.

Keywords: GSC:MIxS;MIMAG:6.0

BioProject: PRJNA593905 metagenome
Retrieve all samples from this project

Submission: The University of Queensland, Christian Rinke; 2019-11-04

Accession:: SAMN13192961
ID:: 13192961

BioProject SRA Nucleotide

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U_72458
U_72458

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Gene ID:25466

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