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missing

Identifiers
BioSample: SAMN13878014; SRA: SRS6011057; USGS: DEM
Organism
soil metagenome
unclassified entries; unclassified sequences; metagenomes; ecological metagenomes
Package
MIMARKS: survey, miscellaneous; version 6.0
Attributes
alkalinitymissing
altitudemissing
ammoniummissing
biomassmissing
bromidemissing
calciummissing
chemical administrationmissing
chloridemissing
chlorophyllmissing
collection datemissing
densitymissing
depthmissing
descriptionoomycete sequences recoverd from bulk soil surrounding non-native Phragmites in DE
diether lipidsmissing
dissolved carbon dioxidemissing
dissolved hydrogenmissing
dissolved inorganic carbonmissing
dissolved organic nitrogenmissing
dissolved oxygenmissing
elevationmissing
broad-scale environmental contextmissing
local-scale environmental contextmissing
environmental mediumsoil
geographic locationUSA:Deleware
latitude and longitude39.45185 N 75.64593 W
miscellaneous parametermissing
nitratemissing
nitritemissing
nitrogenmissing
organic carbonmissing
organic mattermissing
organic nitrogenmissing
organism countmissing
oxygenation status of samplemissing
perturbationmissing
pHmissing
phosphatemissing
phospholipid fatty acidmissing
potassiummissing
pressuremissing
relationship to oxygenmissing
salinitymissing
sample collection device or methodmissing
sample material processingmissing
sample sizemissing
sample storage durationmissing
sample storage locationmissing
sample storage temperaturemissing
sample volume or weight for DNA extractionmissing
silicatemissing
sodiummissing
source material identifiersmissing
sulfatemissing
sulfidemissing
temperaturemissing
water currentmissing
organismsoil metagenome
sample_titlemissing
seq_methods"DNA extracted from soils samples using Qiagen PowerSoil PowerLyzer extraction kits, PCR amplified using ITS2oo primers (Riit et al. 2018), amplicons purified, normalized and sequenced on Illumina MiSeq using V2 chemistry"
Description

oomycete sequences recoverd from bulk soil surrounding non-native Phragmites in DE

Keywords: GSC:MIxS;MIMARKS:6.0

BioProject
PRJNA601975
Retrieve all samples from this project

Submission
mothur; 2020-01-17
Accession:
SAMN13878014
ID:
13878014

BioProject SRA

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