Development Ecology of the Human Microbiome-longit... - BioSample

Development Ecology of the Human Microbiome-longitudinal study; 10894.HR0730

Identifiers: BioSample: SAMEA6584915; SRA: ERS4349217

Organism: human vaginal metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes

Attributes

geographic location	USA
elevation	10
broad-scale environmental context	urban biome
local-scale environmental context	human-associated habitat
environmental package	human-vaginal
environmental medium	mucus
family id	6
geographic location	USA
host age	not provided
host body habitat	UBERON:reproductive system
host body mass index	not provided
host body product	UBERON:mucus
host tissue sampled	UBERON:vagina
host common name	human
host height	not provided
host	Homo sapiens
host subject id	HR.11
host taxonomy ID	9606 (9606)
project name	DevelopmentEcologyoftheHumanMicrobiome_LongitudinalStudy
sample name	qiita_sid_10894:10894.HR0730
sample type	vaginal mucus
sex	female
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2020-02-22T04:05:03Z
ENA-LAST-UPDATE	2020-02-24T21:01:58Z
External Id	SAMEA6584915
INSDC center name	UCSDMI
INSDC first public	2020-02-22T04:05:03Z
INSDC last update	2020-02-24T21:01:58Z
INSDC status	public
Submitter Id	qiita_sid_10894:10894.HR0730
baby_birth_date	8/20/15
baby_sex	female
birth mode	Vag
birth_mode_ms	Vag
body_site_corrected	Vagina
body_site_orig	Vagina
body_site_type	Vaginal
collection_timestamp	2015-07-20
current_abx	No
current_breast_feeding	No
current_formula	No
current_solids	No
date_sampling	7/20/15
date_sampling_category	Day_-60
date_sampling_category_days	Day_-60
date_sampling_category_days_continuous	-60
dna_extracted	TRUE
empo_1	Host-asssociated
empo_2	Animal-associated
empo_3	Animal secretion
exclusive_breastfeed	No
familyid_unique	HR.6
hospital_name	Home
host weight	not provided
host_age_units	years
host_height_units	cm
host_weight_units	kg
irb_institution	NYU
latitude	40.127
longitude	-74.0059
manuscript_use	No-misc
mom_baby	Mom
mother_abx_perinatal	No
mother_abx_perinatal_name	No
mother_prenatal_gbs	No
mother_race	Caucasian
orig_sampleid	HR0730
physical_specimen_location	NYU
physical_specimen_remaining	FALSE
primer_plate	8
real_sampling_time	-31
run	2
scientific_name	human vaginal metagenome
state	NY
subjectid_unique	HR.11
tube_id	HR0730
village	NP

Description: vaginal mucus HR0730

BioProject: PRJEB36857
Retrieve all samples from this project

Submission: EBI; 2020-02-25

Accession:: SAMEA6584915
ID:: 14205742

BioProject SRA

BioSample

National Center for Biotechnology Information

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Development Ecology of the Human Microbiome-longitudinal study; 10894.HR0730

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