11943.6a3zl; CNO_microbiome

Identifiers: BioSample: SAMEA6592540; SRA: ERS4356833

Organism: human oral metagenome
unclassified entries; unclassified sequences; metagenomes; organismal metagenomes

Attributes

age	10.58
altitude	15
calcium	2.33
collection method	swab
collection device	Rovers_Orgenex_Brush_RT
elevation	42
broad-scale environmental context	urban biome
local-scale environmental context	human-associated habitat
environmental package	human-oral
environmental medium	saliva
family id	6
family role	patient
geographic location	Germany:Duesseldorf
host body habitat	UBERON:oral cavity
host body product	UBERON:saliva
host tissue sampled	UBERON:tongue
host common name	human
host	Homo sapiens
host subject id	6a
host taxonomy ID	9606 (9606)
life stage	juvenile
phosphate	1.99
sample name	qiita_sid_11943:11943.6a3zl
sample type	tongue
sex	male
timepoint	1
ENA-CHECKLIST	ERC000011
ENA-FIRST-PUBLIC	2020-02-27T04:05:20Z
ENA-LAST-UPDATE	2020-02-26T22:26:23Z
External Id	SAMEA6592540
INSDC center name	UCSDMI
INSDC first public	2020-02-27T04:05:20Z
INSDC last update	2020-02-26T22:26:23Z
INSDC status	public
Submitter Id	qiita_sid_11943:11943.6a3zl
acne	no
age unit	years
alkaline_phosphatase	254
alkaline_phosphatase_unit	U/l
alt_unit	U/l
arthritis	no
ast	27
ast_unit	U/l
biopsy	no
bisphosphonates	no
calcium_unit	mmol/l
collection_timestamp	2017
creatinine	0.5
creatinine_unit	mg/dl
crohns_disease	no
crp	0.1
crp_unit	mg/dl
dna_extracted	TRUE
elevation_units	meters
empo_1	Host-associated
empo_2	Animal-associated
empo_3	Animal secretion
esr_unit	mm/h
feeling_of_malaisee	no
fever	no
ggt	9
ggt_unit	U/l
host_height_units	cm
host_weight_units	kg
hyperostosis	no
il1_inhibitor	no
il6	1.5
il6_unit	ng/l
ini_elevated_crp	no
ini_esr	55
ini_esr_unit	mm/h
ini_normal_bloodcount	yes
irb_institute	Heinrich_Heine_University_Duesseldorf
irb_protocol_id	2016122195
latitude	51.22
latitude_units	Decimal degrees
local_signs_of_inflammation	no
localisation	tongue_left
longitude	6.77
longitude_units	Decimal degrees
medication_swab	NSAID
mtx	no
multifocal	yes
normal_bloodcount	yes
nsaid	yes
osteoedema	yes
osteolysis	no
pain	yes
palmoplantar_pustulosis	no
phosphate_unit	mmol/l
physical_specimen_location	Heinrich_Heine_University_Duesseldorf
physical_specimen_remaining	FALSE
psoriasis	no
puncture_of_a_joint	no
reduced_range_of_motion	no
saa	3.1
saa_unit	mg/l
scientific_name	human oral metagenome
sclerosis_fibrosis	yes
score	49
score_jansson	49
soft_tissue_edema	yes
spinal	no
spinal_clavicle_sternum	no
steroids	no
sulfasalazin	no
swelling	yes
symmetric_lesions	yes
symptoms_swab	no
tnfalpha	no
tube_id	6a3zl
urea	31
urea_unit	mg/dl
vit_d	30
vit_d_unit	ng/ml

Description: CNO_and_oral_microbiome

BioProject: PRJEB36948 Microbiome CNO
Retrieve all samples from this project

Submission: EBI; 2020-03-03

Accession:: SAMEA6592540
ID:: 14265768

BioProject SRA

BioSample

National Center for Biotechnology Information

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11943.6a3zl; CNO_microbiome

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