metagenomic assembly

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Result Filters

Organism: Sphingobacteriales bacterium
cellular organisms; Bacteria; FCB group; Bacteroidota/Chlorobiota group; Bacteroidota; Sphingobacteriia; Sphingobacteriales; unclassified Sphingobacteriales

Attributes

collection date	2016-11
broad-scale environmental context	forest biome [ENVO:01000174]
local-scale environmental context	temperate mixed forest biome [ENVO:01000212]
environmental medium	wood [ENVO:00002040]
geographic location	Czech Republic: Zofinsky prales National Nature Reserve
latitude and longitude	48.66447093 N 14.70930505 E
isolation source	decomposing wood from intermixed hardwood and conifers
depth	0
elevation	780
annual and seasonal precipitation	917
annual and seasonal temperature	4.3
link to climate information	http://www.emsbrno.cz/p.axd/en/VUKOZ.html
pooling of DNA extracts	2
sample collection device or method	electrical driller
sample material processing	NS Soil, NS Plant
isolate	bin_267
derived from	This BioSample is a metagenomic assembly obtained from the wood decay metagenome BioSamples: SAMN13925149, SAMN13925150, SAMN13925151, SAMN13925152, SAMN13925153, SAMN13925154, SAMN13925155, SAMN13925156, SAMN13925157, SAMN13925158, SAMN13925159, SAMN13925160, SAMN13925161, SAMN13925162, SAMN13925163, SAMN13925164, SAMN13925165, SAMN13925166, SAMN13925167, SAMN13925168, SAMN13925169, SAMN13925170, SAMN13925171, SAMN13925172, and SAMN13925173
sample type	metagenomic assembly
metagenome source	wood decay metagenome
metagenomic	1
environmental-sample	1