Model organism or animal sample from Micropterus c... - BioSample

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Result Filters

Identifiers: BioSample: SAMN14603805; Sample name: CHA-040-Shoal; SRA: SRS6485552

Organism: Micropterus cataractae (shoal bass)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Eupercaria; Centrarchiformes; Centrarchoidei; Centrarchidae; Micropterus

Attributes

strain	not collected
isolate	biological replicate 3
age	not collected
development stage	not collected
sex	not collected
tissue	fin clip
collected by	Jeff Buckingham, Aaron Kern, John Deller, Dray Carl, Mark Rogers, Ashley Nealis, Randy Jackson, Colt Holley, and Joel Bjornen
collection date	2013/2018
sample type	tissue sample
geo:loc:name	USA

Description: Illumina NextSeq 500 V2, 150 bp*2 paired-end reads. DNA prepared for sequencing using RADseq protocol (LGC Genomics; Berlin, Germany), demultiplexed using Illumina bcl2fastq 2.17.1.14 software, adapter clipped, length filtered (reads with final length < 20 bases were discarded), and filtered for presence of MsII recognition sequences at 5' read end.