MAG MJ110802A_bin-617 from assembly ERS4600518

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Result Filters

Identifiers: BioSample: SAMEA6953389; SRA: ERS4663263

Organism: uncultured Campylobacterales bacterium
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; environmental samples

Attributes

ammonium	44.8472753478574
chlorophyll	65
collection date	2011-08-02
dissolved organic carbon	2392.03376988852
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Finland
investigation type	metagenome
isolation source	lake water
methane	157.37
oxygen	0.45
project name	microbes in stratified freshwaters
sample name	MJ110802A_bin-617
temperature	5.78
total phosphorus	4.00338841629893
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:33Z
ENA-LAST-UPDATE	2020-06-18T09:06:54Z
External Id	SAMEA6953389
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:33Z
INSDC last update	2020-06-18T09:06:54Z
INSDC status	public
Submitter Id	MJ110802A_bin-617
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	90.04
completeness software	checkm
contamination score	3.33
geographic location (depth)	2.5
geographic location (latitude)	61.23083333333334
geographic location (longitude)	25.142222222222223
gtdb_taxonomy	d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae
metagenomic OTU	anoxic_mOTU_0388
metagenomic source	lake water metagenome
nitrile+nitrite	43
region	Evo
sample derived from	ERS4600518
sample owner	Jatta Saarenheimo
scientific_name	uncultured Campylobacterales bacterium
sequencing method	NovaSeq
site name	Mekkojärvi
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water