MAG Kiruna_bin-09228 from assembly ERS4649293

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Result Filters

Organism: Candidatus Nomurabacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Patescibacteria group; Parcubacteria group; Candidatus Nomurabacteria; unclassified Candidatus Nomurabacteria

Attributes

collection date	2018-01-24/2021-01-30
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Sweden
investigation type	metagenome
isolation source	lake water
nitrite	0
project name	microbes in stratified freshwaters
sample name	Kiruna_bin-09228
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:33Z
ENA-LAST-UPDATE	2020-06-18T09:07:03Z
External Id	SAMEA6953979
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:33Z
INSDC last update	2020-06-18T09:07:03Z
INSDC status	public
Submitter Id	Kiruna_bin-09228
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	71.67
completeness software	checkm
contamination score	0.56
geographic location (latitude)	not provided
geographic location (longitude)	not provided
gtdb_taxonomy	d__Bacteria;p__Patescibacteria;c__Paceibacteria;o__UBA9983_A;f__UBA9973;g__MFUC01
metagenomic OTU	anoxic_mOTU_0647
metagenomic source	lake water metagenome
region	Kiruna
sample derived from	ERS4649293
sample owner	Gaetan Martin
scientific_name	Candidatus Nomurabacteria bacterium
sequencing method	NovaSeq
swedish lake code	754378-169136
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water