MAG KTt_bin-1381 from assembly ERS4649292

Warning: The NCBI web site requires JavaScript to function. more...

Result Filters

Organism: uncultured Anaerolineae bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Anaerolineae; environmental samples

Attributes

collection date	2016-01-02/2016-01-24
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Sweden
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	KTt_bin-1381
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:07:44Z
External Id	SAMEA6954359
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:07:44Z
INSDC status	public
Submitter Id	KTt_bin-1381
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	52.45
completeness software	checkm
contamination score	4.55
ferrous iron	0
geographic location (latitude)	63.34916666666667
geographic location (longitude)	14.458888888888888
gtdb_taxonomy	d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__envOPS12;g__UBA5195
metagenomic OTU	anoxic_mOTU_0611
metagenomic source	lake water metagenome
region	Jämtland
sample derived from	ERS4649292
sample owner	Sari Peura
scientific_name	uncultured Anaerolineae bacterium
sequencing method	NovaSeq
site name	Lomtjärnan
swedish lake code	703480-142137
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water