MAG MJ_bin-1077 from assembly ERS4649304

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Result Filters

Organism: uncultured Campylobacterales bacterium
cellular organisms; Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; environmental samples

Attributes

collection date	2015-08-11
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Finland
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	MJ_bin-1077
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:07:52Z
External Id	SAMEA6954984
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:07:52Z
INSDC status	public
Submitter Id	MJ_bin-1077
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	88.96
completeness software	checkm
contamination score	2.05
geographic location (latitude)	61.23083333333334
geographic location (longitude)	25.142222222222223
gtdb_taxonomy	d__Bacteria;p__Campylobacterota;c__Campylobacteria;o__Campylobacterales;f__Sulfurimonadaceae
metagenomic OTU	anoxic_mOTU_0506
metagenomic source	lake water metagenome
region	Evo
sample derived from	ERS4649304
sample owner	Leyden Fernandez
scientific_name	uncultured Campylobacterales bacterium
sequencing method	NovaSeq
site name	Mekkojärvi
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water

MAG MJ_bin-1077 from assembly ERS4649304
MAG MJ_bin-1077 from assembly ERS4649304

biosample
cardiac muscle myosin heavy chain 6 alpha, partial [Rheocles vatosoa]
cardiac muscle myosin heavy chain 6 alpha, partial [Rheocles vatosoa]
gi|810062196|gb|AKE13994.1|

Protein
SPESP1-NOX5 readthrough [Homo sapiens]
SPESP1-NOX5 readthrough [Homo sapiens]
gi|296278231|ref|NP_001171709.1|

Protein
PREDICTED: Equus caballus phospholipase D2 (PLD2), transcript variant X4, mRNA
PREDICTED: Equus caballus phospholipase D2 (PLD2), transcript variant X4, mRNA
gi|1333563969|ref|XM_023653369.1|

Nucleotide

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