MAG AlinenLipids_bin-7426 from assembly ERS4649271

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Result Filters

Organism: Candidatus Doudnabacteria bacterium
cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Doudnabacteria; unclassified Candidatus Doudnabacteria

Attributes

collection date	2018-08-22
broad-scale environmental context	lentic water body
local-scale environmental context	lake
environmental medium	water
geographic location	Finland
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	AlinenLipids_bin-7426
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:08:10Z
External Id	SAMEA6955465
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:08:10Z
INSDC status	public
Submitter Id	AlinenLipids_bin-7426
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	67.99
completeness software	checkm
contamination score	2.09
geographic location (latitude)	61.20805555555556
geographic location (longitude)	25.11388888888889
gtdb_taxonomy	d__Bacteria;p__Patescibacteria;c__Doudnabacteria;o__UBA920;f__UBA920;g__PALSA-1336
metagenomic OTU	anoxic_mOTU_0710
metagenomic source	lake water metagenome
region	Evo
sample derived from	ERS4649271
sample owner	Sari Peura
scientific_name	Candidatus Doudnabacteria bacterium
sequencing method	NovaSeq
site name	Alinen Mustajärvi
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water