MAG LaPlata_bin-0274 from assembly ERS4649300

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Result Filters

Organism: uncultured Anaerolineae bacterium
cellular organisms; Bacteria; Bacillati; Chloroflexota; Anaerolineae; environmental samples

Attributes

collection date	2018-07-18
broad-scale environmental context	lentic water body
local-scale environmental context	reservoir
environmental medium	water
geographic location	Puerto Rico
investigation type	metagenome
isolation source	lake water
project name	microbes in stratified freshwaters
sample name	LaPlata_bin-0274
ENA-CHECKLIST	ERC000047
ENA-FIRST-PUBLIC	2020-06-15T17:03:32Z
ENA-LAST-UPDATE	2020-06-18T09:08:11Z
External Id	SAMEA6955541
INSDC center name	BILS
INSDC first public	2020-06-15T17:03:32Z
INSDC last update	2020-06-18T09:08:11Z
INSDC status	public
Submitter Id	LaPlata_bin-0274
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	megahit
binning parameters	min_len:1500,min_bin_size:10000,maxP:93,minS:50
binning software	metabat
collection data	metagenome
completeness score	94.55
completeness software	checkm
contamination score	3.64
geographic location (latitude)	18.333333333333332
geographic location (longitude)	-66.23666666666666
gtdb_taxonomy	d__Bacteria;p__Chloroflexota;c__Anaerolineae;o__Anaerolineales;f__envOPS12;g__UBA5195
metagenomic OTU	anoxic_mOTU_1791
metagenomic source	lake water metagenome
region	Bayamón
sample derived from	ERS4649300
sample owner	Sari Peura
scientific_name	uncultured Anaerolineae bacterium
sequencing method	NovaSeq
site name	La Plata
taxonomic identity marker	gtdbtk followed by sourmash-lca, see publication
water environmental package	water

MAG LaPlata_bin-0274 from assembly ERS4649300
MAG LaPlata_bin-0274 from assembly ERS4649300

biosample
NADH dehydrogenase subunit 4 (mitochondrion) [Tanichthys huidongensis]
NADH dehydrogenase subunit 4 (mitochondrion) [Tanichthys huidongensis]
gi|2646818619|gb|WRO39445.1|

Protein
Chromosome neighbors for GEO Profiles (Select 90466014) (20)
GEO Profiles
Links from autonomous proteins to species level organisms for Pro... (5)
Links from autonomous proteins to species level organisms for Protein (Select 499174810)
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Taxonomy
Oryza sativa Japonica Group chromosome 5, ASM3414082v1
Oryza sativa Japonica Group chromosome 5, ASM3414082v1
gi|2743084198|gnl|ASM:GCF_034140935 f|NC_089039.1||gpp|GPC_000022462.1||gnl|NCBI_GENOMES|164623

Nucleotide

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