Metagenome-Assembled Genome (MAG)

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Result Filters

Organism: Merdimonas faecis
cellular organisms; Bacteria; Terrabacteria group; Bacillota; Clostridia; Lachnospirales; Lachnospiraceae; Merdimonas

Attributes

collection date	not provided
broad-scale environmental context	human-associated habitat
local-scale environmental context	human gut
environmental medium	faeces
geographic location	China
investigation type	metagenome-assembled genome
isolation source	human gut
project name	Human gut MAGs
sample name	ERR1190619_bin.17
ENA-CHECKLIST	ERC000050
ENA-FIRST-PUBLIC	2021-01-18T04:13:10Z
ENA-LAST-UPDATE	2020-04-15T14:04:18Z
External Id	SAMEA6685019
INSDC center name	EMG
INSDC first public	2021-01-18T04:13:10Z
INSDC last update	2020-04-15T14:04:18Z
INSDC status	public
Submitter Id	ERR1190619_bin.17
assembly quality	Many fragments with little to no review of assembly other than reporting of standard assembly statistics
assembly software	spades_v3.11.1
binning parameters	default
binning software	MetaWRAP v1.1
broker name	EBI-EMG
completeness score	80.50
completeness software	CheckM v1.0.11
contamination score	1.66
geographic location (latitude)	not provided
geographic location (longitude)	not provided
metagenomic source	human gut metagenome
sample derived from	ERS1015694
scientific_name	Merdimonas faecis
sequencing method	Illumina HiSeq 2500
taxonomic identity marker	multi-marker approach