Invertebrate sample from Athalia rosae

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Result Filters

Organism: Athalia rosae (coleseed sawfly)
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Protostomia; Ecdysozoa; Panarthropoda; Arthropoda; Mandibulata; Pancrustacea; Hexapoda; Insecta; Dicondylia; Pterygota; Neoptera; Endopterygota; Hymenoptera; Tenthredinoidea; Athaliidae; Athalia

Attributes

sample type	RNA
sex	male
isolate	SNSL14
breed	NA
host	NA
isolation source	F4 bred from wild ind
collection date	2019-10-08
geographic location	Germany: Bielefeld
tissue	Whole animal
species_type	Insect
developmetal_stage	L4 larvae
collection	Adults killed in liquid nitrogen and then stored at -80oC until extraction.
extraction	Invitrogen PureLink RNA Mini Kit with on column DNase treatment.
nucleic_acid_type	total RNA
final_sample	Dissolved RNA-free or DEPC treated water
Conc. (ng/ ul)	1219
Vol (ul)	20
Total Amount (ng)	24380
Total Amount (ug)	24.38
sequencing_platform	NovaSeq6000 with S4 Flowcells (Illumina, CA, United States)
raw_reads	52215338
clean_reads	51637099
raw_base(g)	15.7
clean_base(g)	15.5
effective_rate(%)	98.89
error_rate(%)	0.03
q20(%)	97.91
q30(%)	94.23
gc_content(%)	45.98